Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 KRT19P2-202ENST00000557173 1012 ntBASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 AC023141.13-201ENST00000604991 943 ntBASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.46■□□□□ 0.07
NPIPA3F8WFD2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPA3F8WFD2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.46■□□□□ 0.06
NPIPA3F8WFD2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.46■□□□□ 0.06
NPIPA3F8WFD2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPA3F8WFD2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPIPA3F8WFD2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 PMS2P2-201ENST00000425039 1128 ntBASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 CEND1P1-201ENST00000451006 455 ntBASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 CXCL1P1-201ENST00000502804 216 ntBASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 PDPK2P-202ENST00000562415 1191 ntBASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NPIPA3F8WFD2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 AC093525.9-201ENST00000624961 1746 ntBASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 RHOQP3-201ENST00000437982 621 ntBASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 AP006288.1-201ENST00000446065 395 ntBASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 YBX1P5-201ENST00000509441 847 ntBASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NPIPA3F8WFD2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms