Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 AL391256.1-201ENST00000443260 1855 ntBASIC19.5■□□□□ 0.71
PALM3A6NDB9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 HTR7P1-202ENST00000624664 4411 ntBASIC19.49■□□□□ 0.71
PALM3A6NDB9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 AL009183.1-201ENST00000603760 355 ntBASIC19.49■□□□□ 0.71
PALM3A6NDB9 AC139530.3-201ENST00000620344 690 ntBASIC19.49■□□□□ 0.71
PALM3A6NDB9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PALM3A6NDB9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.49■□□□□ 0.71
PALM3A6NDB9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 AC092474.2-201ENST00000424288 719 ntBASIC19.48■□□□□ 0.71
PALM3A6NDB9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 AC109635.5-201ENST00000533593 962 ntBASIC19.48■□□□□ 0.71
PALM3A6NDB9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 MIR3909-201ENST00000579518 119 ntBASIC19.48■□□□□ 0.71
PALM3A6NDB9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 AC099522.2-201ENST00000607001 744 ntBASIC19.48■□□□□ 0.71
PALM3A6NDB9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 ELL2P1-201ENST00000413990 1906 ntBASIC19.48■□□□□ 0.71
PALM3A6NDB9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 AL671710.1-201ENST00000610245 2349 ntBASIC19.48■□□□□ 0.71
PALM3A6NDB9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PALM3A6NDB9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 AC022211.2-201ENST00000585075 2527 ntBASIC19.48■□□□□ 0.71
PALM3A6NDB9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PALM3A6NDB9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 MIR1233-2-201ENST00000408138 82 ntBASIC19.47■□□□□ 0.71
PALM3A6NDB9 MIR1233-1-201ENST00000408722 82 ntBASIC19.47■□□□□ 0.71
PALM3A6NDB9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 AC112191.1-201ENST00000523689 701 ntBASIC19.47■□□□□ 0.71
PALM3A6NDB9 AP002490.2-201ENST00000524791 560 ntBASIC19.47■□□□□ 0.71
PALM3A6NDB9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PALM3A6NDB9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 AL031055.1-201ENST00000606362 631 ntBASIC19.47■□□□□ 0.71
PALM3A6NDB9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PALM3A6NDB9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms