Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SBNO1A3KN83 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.7■■□□□ 1.22
SBNO1A3KN83 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 AC135586.1-201ENST00000539323 574 ntBASIC22.69■■□□□ 1.22
SBNO1A3KN83 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.69■■□□□ 1.22
SBNO1A3KN83 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SBNO1A3KN83 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.68■■□□□ 1.22
SBNO1A3KN83 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SBNO1A3KN83 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SBNO1A3KN83 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.68■■□□□ 1.22
SBNO1A3KN83 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SBNO1A3KN83 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SBNO1A3KN83 RPS2P32-201ENST00000439199 892 ntBASIC22.68■■□□□ 1.22
SBNO1A3KN83 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC22.68■■□□□ 1.22
SBNO1A3KN83 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC22.68■■□□□ 1.22
SBNO1A3KN83 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SBNO1A3KN83 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.68■■□□□ 1.22
SBNO1A3KN83 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC22.68■■□□□ 1.22
SBNO1A3KN83 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SBNO1A3KN83 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 MTND6P24-201ENST00000440466 518 ntBASIC22.67■■□□□ 1.22
SBNO1A3KN83 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 AL079307.3-201ENST00000556114 283 ntBASIC22.67■■□□□ 1.22
SBNO1A3KN83 AC105021.1-202ENST00000570572 669 ntBASIC22.67■■□□□ 1.22
SBNO1A3KN83 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SBNO1A3KN83 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SBNO1A3KN83 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 AC087499.6-201ENST00000411576 835 ntBASIC22.66■■□□□ 1.22
SBNO1A3KN83 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC22.66■■□□□ 1.22
SBNO1A3KN83 GNAQP1-201ENST00000444815 1067 ntBASIC22.66■■□□□ 1.22
SBNO1A3KN83 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC22.66■■□□□ 1.22
SBNO1A3KN83 ARL16-202ENST00000570561 768 ntTSL 2 BASIC22.66■■□□□ 1.22
SBNO1A3KN83 AC132938.2-201ENST00000579188 680 ntBASIC22.66■■□□□ 1.22
SBNO1A3KN83 AL591163.1-201ENST00000641757 987 ntBASIC22.66■■□□□ 1.22
SBNO1A3KN83 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SBNO1A3KN83 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SBNO1A3KN83 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.65■■□□□ 1.22
SBNO1A3KN83 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC22.65■■□□□ 1.22
SBNO1A3KN83 RASL12-203ENST00000434605 982 ntTSL 2 BASIC22.65■■□□□ 1.22
SBNO1A3KN83 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC22.65■■□□□ 1.22
SBNO1A3KN83 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms