Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01558Q9Y6Z2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01558Q9Y6Z2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC01558Q9Y6Z2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01558Q9Y6Z2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01558Q9Y6Z2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC01558Q9Y6Z2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC01558Q9Y6Z2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01558Q9Y6Z2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 LINC01124-201ENST00000409786 2117 ntBASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC01558Q9Y6Z2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 WHAMMP2-203ENST00000563942 1603 ntBASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01558Q9Y6Z2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC01558Q9Y6Z2 EP400NL-214ENST00000641289 2402 ntBASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 AC022211.4-201ENST00000625094 2161 ntBASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 AC092667.1-201ENST00000434301 2586 ntBASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC01558Q9Y6Z2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms