Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LIN7CQ9NUP9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
LIN7CQ9NUP9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LIN7CQ9NUP9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LIN7CQ9NUP9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
LIN7CQ9NUP9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LIN7CQ9NUP9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LIN7CQ9NUP9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.83■□□□□ 0.76
LIN7CQ9NUP9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LIN7CQ9NUP9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LIN7CQ9NUP9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LIN7CQ9NUP9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.82■□□□□ 0.76
LIN7CQ9NUP9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LIN7CQ9NUP9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LIN7CQ9NUP9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LIN7CQ9NUP9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LIN7CQ9NUP9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN7CQ9NUP9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
LIN7CQ9NUP9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LIN7CQ9NUP9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LIN7CQ9NUP9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LIN7CQ9NUP9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.8■□□□□ 0.76
LIN7CQ9NUP9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN7CQ9NUP9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LIN7CQ9NUP9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIN7CQ9NUP9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN7CQ9NUP9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 AC022211.4-201ENST00000625094 2161 ntBASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIN7CQ9NUP9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LIN7CQ9NUP9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIN7CQ9NUP9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIN7CQ9NUP9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIN7CQ9NUP9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LIN7CQ9NUP9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIN7CQ9NUP9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LIN7CQ9NUP9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LIN7CQ9NUP9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIN7CQ9NUP9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIN7CQ9NUP9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIN7CQ9NUP9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LIN7CQ9NUP9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIN7CQ9NUP9 AC096887.2-201ENST00000623443 1957 ntBASIC19.75■□□□□ 0.75
LIN7CQ9NUP9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
LIN7CQ9NUP9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.75■□□□□ 0.75
LIN7CQ9NUP9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN7CQ9NUP9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LIN7CQ9NUP9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
LIN7CQ9NUP9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 AL359258.2-201ENST00000564063 1566 ntBASIC19.74■□□□□ 0.75
LIN7CQ9NUP9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 AC022413.1-201ENST00000624602 984 ntBASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.73■□□□□ 0.75
LIN7CQ9NUP9 AC138932.3-201ENST00000567634 1902 ntBASIC19.72■□□□□ 0.75
LIN7CQ9NUP9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms