Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB16Q9NRJ7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 AL359258.2-201ENST00000564063 1566 ntBASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB16Q9NRJ7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB16Q9NRJ7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB16Q9NRJ7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB16Q9NRJ7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB16Q9NRJ7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB16Q9NRJ7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB16Q9NRJ7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 ERN1-208ENST00000606895 2068 ntBASIC20.6■□□□□ 0.89
PCDHB16Q9NRJ7 AC133561.1-201ENST00000568600 2415 ntBASIC20.59■□□□□ 0.89
PCDHB16Q9NRJ7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB16Q9NRJ7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB16Q9NRJ7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB16Q9NRJ7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB16Q9NRJ7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB16Q9NRJ7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 MIR7108-201ENST00000614319 87 ntBASIC20.58■□□□□ 0.89
PCDHB16Q9NRJ7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHB16Q9NRJ7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PCDHB16Q9NRJ7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB16Q9NRJ7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 AL359504.2-201ENST00000605506 1601 ntBASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 HLA-V-202ENST00000446817 847 ntBASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
PCDHB16Q9NRJ7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHB16Q9NRJ7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHB16Q9NRJ7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHB16Q9NRJ7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB16Q9NRJ7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHB16Q9NRJ7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHB16Q9NRJ7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB16Q9NRJ7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB16Q9NRJ7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHB16Q9NRJ7 CLDN5-201ENST00000403084 2357 ntBASIC20.54■□□□□ 0.88
PCDHB16Q9NRJ7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PCDHB16Q9NRJ7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB16Q9NRJ7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB16Q9NRJ7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHB16Q9NRJ7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHB16Q9NRJ7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms