Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ZNF408Q9H9D4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.74■■■□□ 2.19
ZNF408Q9H9D4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.74■■■□□ 2.19
ZNF408Q9H9D4 AC010997.5-201ENST00000609182 354 ntBASIC28.74■■■□□ 2.19
ZNF408Q9H9D4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.74■■■□□ 2.19
ZNF408Q9H9D4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZNF408Q9H9D4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.73■■■□□ 2.19
ZNF408Q9H9D4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.73■■■□□ 2.19
ZNF408Q9H9D4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZNF408Q9H9D4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ZNF408Q9H9D4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
ZNF408Q9H9D4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ZNF408Q9H9D4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZNF408Q9H9D4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 RARRES2P6-201ENST00000567333 442 ntBASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 MIR3621-201ENST00000580529 85 ntBASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZNF408Q9H9D4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.7■■■□□ 2.19
ZNF408Q9H9D4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ZNF408Q9H9D4 MIR4466-201ENST00000606121 54 ntBASIC28.7■■■□□ 2.18
ZNF408Q9H9D4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ZNF408Q9H9D4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
ZNF408Q9H9D4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ZNF408Q9H9D4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ZNF408Q9H9D4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ZNF408Q9H9D4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.69■■■□□ 2.18
ZNF408Q9H9D4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ZNF408Q9H9D4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ZNF408Q9H9D4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ZNF408Q9H9D4 ZNRF2P3-201ENST00000424200 374 ntBASIC28.68■■■□□ 2.18
ZNF408Q9H9D4 AL356740.2-201ENST00000601559 647 ntBASIC28.68■■■□□ 2.18
ZNF408Q9H9D4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ZNF408Q9H9D4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
ZNF408Q9H9D4 KRT18P10-201ENST00000388836 1287 ntBASIC28.67■■■□□ 2.18
ZNF408Q9H9D4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.67■■■□□ 2.18
ZNF408Q9H9D4 MTDHP2-201ENST00000601468 714 ntBASIC28.67■■■□□ 2.18
ZNF408Q9H9D4 MIR6724-1-201ENST00000616420 92 ntBASIC28.67■■■□□ 2.18
ZNF408Q9H9D4 MIR6724-2-201ENST00000616483 92 ntBASIC28.67■■■□□ 2.18
ZNF408Q9H9D4 MIR6724-4-201ENST00000617390 92 ntBASIC28.67■■■□□ 2.18
ZNF408Q9H9D4 MIR6724-3-201ENST00000622482 92 ntBASIC28.67■■■□□ 2.18
ZNF408Q9H9D4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ZNF408Q9H9D4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
ZNF408Q9H9D4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
ZNF408Q9H9D4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.65■■■□□ 2.18
ZNF408Q9H9D4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
ZNF408Q9H9D4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.65■■■□□ 2.18
ZNF408Q9H9D4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.65■■■□□ 2.18
ZNF408Q9H9D4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ZNF408Q9H9D4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ZNF408Q9H9D4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ZNF408Q9H9D4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.64■■■□□ 2.18
ZNF408Q9H9D4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC28.64■■■□□ 2.18
ZNF408Q9H9D4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
ZNF408Q9H9D4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC28.63■■■□□ 2.17
ZNF408Q9H9D4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ZNF408Q9H9D4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.63■■■□□ 2.17
ZNF408Q9H9D4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ZNF408Q9H9D4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.63■■■□□ 2.17
ZNF408Q9H9D4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
ZNF408Q9H9D4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
ZNF408Q9H9D4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.62■■■□□ 2.17
ZNF408Q9H9D4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ZNF408Q9H9D4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.62■■■□□ 2.17
ZNF408Q9H9D4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
ZNF408Q9H9D4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ZNF408Q9H9D4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ZNF408Q9H9D4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
ZNF408Q9H9D4 AC133561.4-201ENST00000566112 224 ntBASIC28.61■■■□□ 2.17
ZNF408Q9H9D4 MIR4281-201ENST00000580852 62 ntBASIC28.61■■■□□ 2.17
ZNF408Q9H9D4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
ZNF408Q9H9D4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
ZNF408Q9H9D4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.6■■■□□ 2.17
ZNF408Q9H9D4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.6■■■□□ 2.17
ZNF408Q9H9D4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ZNF408Q9H9D4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.59■■■□□ 2.17
ZNF408Q9H9D4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ZNF408Q9H9D4 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.59■■■□□ 2.17
ZNF408Q9H9D4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.59■■■□□ 2.17
ZNF408Q9H9D4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ZNF408Q9H9D4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ZNF408Q9H9D4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.58■■■□□ 2.17
ZNF408Q9H9D4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.58■■■□□ 2.17
ZNF408Q9H9D4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ZNF408Q9H9D4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ZNF408Q9H9D4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
ZNF408Q9H9D4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.58■■■□□ 2.17
ZNF408Q9H9D4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
ZNF408Q9H9D4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ZNF408Q9H9D4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ZNF408Q9H9D4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
ZNF408Q9H9D4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.57■■■□□ 2.16
ZNF408Q9H9D4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.57■■■□□ 2.16
ZNF408Q9H9D4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
ZNF408Q9H9D4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.56■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms