Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.69■□□□□ 0.9
CMTM3Q96MX0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CMTM3Q96MX0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CMTM3Q96MX0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CMTM3Q96MX0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CMTM3Q96MX0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.66■□□□□ 0.9
CMTM3Q96MX0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CMTM3Q96MX0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CMTM3Q96MX0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CMTM3Q96MX0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.66■□□□□ 0.9
CMTM3Q96MX0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CMTM3Q96MX0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CMTM3Q96MX0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CMTM3Q96MX0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CMTM3Q96MX0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CMTM3Q96MX0 DUSP8P5-201ENST00000422884 1815 ntBASIC20.64■□□□□ 0.9
CMTM3Q96MX0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CMTM3Q96MX0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.64■□□□□ 0.89
CMTM3Q96MX0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CMTM3Q96MX0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CMTM3Q96MX0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMTM3Q96MX0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CMTM3Q96MX0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMTM3Q96MX0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CMTM3Q96MX0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CMTM3Q96MX0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CMTM3Q96MX0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CMTM3Q96MX0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CMTM3Q96MX0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CMTM3Q96MX0 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.62■□□□□ 0.89
CMTM3Q96MX0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CMTM3Q96MX0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
CMTM3Q96MX0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.61■□□□□ 0.89
CMTM3Q96MX0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CMTM3Q96MX0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CMTM3Q96MX0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CMTM3Q96MX0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CMTM3Q96MX0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMTM3Q96MX0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CMTM3Q96MX0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.59■□□□□ 0.89
CMTM3Q96MX0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.59■□□□□ 0.89
CMTM3Q96MX0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CMTM3Q96MX0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.58■□□□□ 0.89
CMTM3Q96MX0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CMTM3Q96MX0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.58■□□□□ 0.88
CMTM3Q96MX0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CMTM3Q96MX0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CMTM3Q96MX0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.57■□□□□ 0.88
CMTM3Q96MX0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CMTM3Q96MX0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CMTM3Q96MX0 SLC6A10P-202ENST00000431994 2058 ntBASIC20.57■□□□□ 0.88
CMTM3Q96MX0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.56■□□□□ 0.88
CMTM3Q96MX0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CMTM3Q96MX0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CMTM3Q96MX0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CMTM3Q96MX0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CMTM3Q96MX0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CMTM3Q96MX0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CMTM3Q96MX0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CMTM3Q96MX0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CMTM3Q96MX0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CMTM3Q96MX0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.55■□□□□ 0.88
CMTM3Q96MX0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CMTM3Q96MX0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMTM3Q96MX0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CMTM3Q96MX0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMTM3Q96MX0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CMTM3Q96MX0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.54■□□□□ 0.88
CMTM3Q96MX0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CMTM3Q96MX0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMTM3Q96MX0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms