Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LSMEM1Q8N8F7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.01■■□□□ 1.11
LSMEM1Q8N8F7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LSMEM1Q8N8F7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22■■□□□ 1.11
LSMEM1Q8N8F7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22■■□□□ 1.11
LSMEM1Q8N8F7 MIR4449-201ENST00000578365 66 ntBASIC22■■□□□ 1.11
LSMEM1Q8N8F7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22■■□□□ 1.11
LSMEM1Q8N8F7 MIR3960-201ENST00000583311 91 ntBASIC22■■□□□ 1.11
LSMEM1Q8N8F7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LSMEM1Q8N8F7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 SMPD5-203ENST00000639008 1464 ntBASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 ECEL1P2-201ENST00000461596 1295 ntBASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LSMEM1Q8N8F7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
LSMEM1Q8N8F7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
LSMEM1Q8N8F7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.98■■□□□ 1.11
LSMEM1Q8N8F7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
LSMEM1Q8N8F7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LSMEM1Q8N8F7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
LSMEM1Q8N8F7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
LSMEM1Q8N8F7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 AC022413.1-201ENST00000624602 984 ntBASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LSMEM1Q8N8F7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LSMEM1Q8N8F7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LSMEM1Q8N8F7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LSMEM1Q8N8F7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LSMEM1Q8N8F7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LSMEM1Q8N8F7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.95■■□□□ 1.1
LSMEM1Q8N8F7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LSMEM1Q8N8F7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LSMEM1Q8N8F7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LSMEM1Q8N8F7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
LSMEM1Q8N8F7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.93■■□□□ 1.1
LSMEM1Q8N8F7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LSMEM1Q8N8F7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.93■■□□□ 1.1
LSMEM1Q8N8F7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LSMEM1Q8N8F7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LSMEM1Q8N8F7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LSMEM1Q8N8F7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.9■■□□□ 1.1
LSMEM1Q8N8F7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LSMEM1Q8N8F7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.89■■□□□ 1.09
LSMEM1Q8N8F7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
LSMEM1Q8N8F7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LSMEM1Q8N8F7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LSMEM1Q8N8F7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LSMEM1Q8N8F7 RP9P-202ENST00000450133 1212 ntBASIC21.88■■□□□ 1.09
LSMEM1Q8N8F7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LSMEM1Q8N8F7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LSMEM1Q8N8F7 AC097639.1-201ENST00000565519 1891 ntBASIC21.88■■□□□ 1.09
LSMEM1Q8N8F7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LSMEM1Q8N8F7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LSMEM1Q8N8F7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.87■■□□□ 1.09
LSMEM1Q8N8F7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LSMEM1Q8N8F7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LSMEM1Q8N8F7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LSMEM1Q8N8F7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.86■■□□□ 1.09
LSMEM1Q8N8F7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms