Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST2H3AQ71DI3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HIST2H3AQ71DI3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HIST2H3AQ71DI3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST2H3AQ71DI3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.07■□□□□ 0.96
HIST2H3AQ71DI3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
HIST2H3AQ71DI3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 RP9P-202ENST00000450133 1212 ntBASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST2H3AQ71DI3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST2H3AQ71DI3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
HIST2H3AQ71DI3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.04■□□□□ 0.96
HIST2H3AQ71DI3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HIST2H3AQ71DI3 AC007029.1-201ENST00000604183 313 ntBASIC21.04■□□□□ 0.96
HIST2H3AQ71DI3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIST2H3AQ71DI3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIST2H3AQ71DI3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIST2H3AQ71DI3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HIST2H3AQ71DI3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST2H3AQ71DI3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
HIST2H3AQ71DI3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST2H3AQ71DI3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HIST2H3AQ71DI3 AC093536.1-201ENST00000569153 554 ntBASIC21.02■□□□□ 0.96
HIST2H3AQ71DI3 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.02■□□□□ 0.96
HIST2H3AQ71DI3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HIST2H3AQ71DI3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.01■□□□□ 0.95
HIST2H3AQ71DI3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.01■□□□□ 0.95
HIST2H3AQ71DI3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.01■□□□□ 0.95
HIST2H3AQ71DI3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.01■□□□□ 0.95
HIST2H3AQ71DI3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HIST2H3AQ71DI3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21■□□□□ 0.95
HIST2H3AQ71DI3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21■□□□□ 0.95
HIST2H3AQ71DI3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HIST2H3AQ71DI3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21■□□□□ 0.95
HIST2H3AQ71DI3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HIST2H3AQ71DI3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HIST2H3AQ71DI3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIST2H3AQ71DI3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HIST2H3AQ71DI3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HIST2H3AQ71DI3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.99■□□□□ 0.95
HIST2H3AQ71DI3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.99■□□□□ 0.95
HIST2H3AQ71DI3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 RAP2CP1-202ENST00000605179 643 ntBASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIST2H3AQ71DI3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HIST2H3AQ71DI3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST2H3AQ71DI3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.97■□□□□ 0.95
HIST2H3AQ71DI3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.97■□□□□ 0.95
HIST2H3AQ71DI3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST2H3AQ71DI3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIST2H3AQ71DI3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 RNF126P1-201ENST00000567452 1320 ntBASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 AC097639.1-201ENST00000565519 1891 ntBASIC20.96■□□□□ 0.95
HIST2H3AQ71DI3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST2H3AQ71DI3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST2H3AQ71DI3 AC026202.3-201ENST00000600805 1127 ntBASIC20.95■□□□□ 0.94
HIST2H3AQ71DI3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIST2H3AQ71DI3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST2H3AQ71DI3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIST2H3AQ71DI3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HIST2H3AQ71DI3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.94■□□□□ 0.94
HIST2H3AQ71DI3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms