Protein–RNA interactions for Protein: Q5VWM5

PRAMEF9, PRAME family member 9/15, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9Q5VWM5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRAMEF9Q5VWM5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRAMEF9Q5VWM5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.23■■□□□ 1.31
PRAMEF9Q5VWM5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF9Q5VWM5 AC093536.1-201ENST00000569153 554 ntBASIC23.22■■□□□ 1.31
PRAMEF9Q5VWM5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF9Q5VWM5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
PRAMEF9Q5VWM5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF9Q5VWM5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF9Q5VWM5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.21■■□□□ 1.31
PRAMEF9Q5VWM5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF9Q5VWM5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
PRAMEF9Q5VWM5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PRAMEF9Q5VWM5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.2■■□□□ 1.3
PRAMEF9Q5VWM5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF9Q5VWM5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.2■■□□□ 1.3
PRAMEF9Q5VWM5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.19■■□□□ 1.3
PRAMEF9Q5VWM5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF9Q5VWM5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF9Q5VWM5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF9Q5VWM5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF9Q5VWM5 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.18■■□□□ 1.3
PRAMEF9Q5VWM5 RNF126P1-201ENST00000567452 1320 ntBASIC23.18■■□□□ 1.3
PRAMEF9Q5VWM5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PRAMEF9Q5VWM5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF9Q5VWM5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PRAMEF9Q5VWM5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF9Q5VWM5 RAP2CP1-202ENST00000605179 643 ntBASIC23.17■■□□□ 1.3
PRAMEF9Q5VWM5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF9Q5VWM5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF9Q5VWM5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PRAMEF9Q5VWM5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
PRAMEF9Q5VWM5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF9Q5VWM5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF9Q5VWM5 AC026202.3-201ENST00000600805 1127 ntBASIC23.16■■□□□ 1.3
PRAMEF9Q5VWM5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF9Q5VWM5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PRAMEF9Q5VWM5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.14■■□□□ 1.3
PRAMEF9Q5VWM5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PRAMEF9Q5VWM5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.14■■□□□ 1.29
PRAMEF9Q5VWM5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.14■■□□□ 1.29
PRAMEF9Q5VWM5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PRAMEF9Q5VWM5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PRAMEF9Q5VWM5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 HSD17B1P1-201ENST00000590052 955 ntBASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
PRAMEF9Q5VWM5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF9Q5VWM5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 AC009831.1-201ENST00000580420 1582 ntBASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PRAMEF9Q5VWM5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.1■■□□□ 1.29
PRAMEF9Q5VWM5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.1■■□□□ 1.29
PRAMEF9Q5VWM5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRAMEF9Q5VWM5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRAMEF9Q5VWM5 AC135731.1-201ENST00000569415 2548 ntBASIC23.08■■□□□ 1.28
PRAMEF9Q5VWM5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PRAMEF9Q5VWM5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PRAMEF9Q5VWM5 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRAMEF9Q5VWM5 AC097639.1-201ENST00000565519 1891 ntBASIC23.07■■□□□ 1.28
PRAMEF9Q5VWM5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms