Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 YJR084WYJR084W 1272 nt5.02□□□□□ -1.61
MSA1Q08471 DUS4YLR405W 1104 nt5.02□□□□□ -1.61
MSA1Q08471 GLC8YMR311C 690 nt5.02□□□□□ -1.61
MSA1Q08471 RUF23RUF23 254 nt5.02□□□□□ -1.61
MSA1Q08471 YPL257WYPL257W 582 nt5.02□□□□□ -1.61
MSA1Q08471 CRF1YDR223W 1404 nt5.02□□□□□ -1.61
MSA1Q08471 MTC2YKL098W 1074 nt5.01□□□□□ -1.61
MSA1Q08471 GTO3YMR251W 1101 nt5.01□□□□□ -1.61
MSA1Q08471 YNL285WYNL285W 372 nt5.01□□□□□ -1.61
MSA1Q08471 DFR1YOR236W 636 nt5.01□□□□□ -1.61
MSA1Q08471 TFB4YPR056W 1017 nt5.01□□□□□ -1.61
MSA1Q08471 YGR054WYGR054W 1929 nt5.01□□□□□ -1.61
MSA1Q08471 KEL1YHR158C 3495 nt5□□□□□ -1.61
MSA1Q08471 YDR015CYDR015C 240 nt5□□□□□ -1.61
MSA1Q08471 SUF5tG(CCC)O 72 nt5□□□□□ -1.61
MSA1Q08471 HEM2YGL040C 1029 nt5□□□□□ -1.61
MSA1Q08471 DID2YKR035W-A 615 nt5□□□□□ -1.61
MSA1Q08471 MRPS12YNR036C 462 nt5□□□□□ -1.61
MSA1Q08471 STB5YHR178W 2232 nt5□□□□□ -1.61
MSA1Q08471 PMT3YOR321W 2262 nt4.99□□□□□ -1.61
MSA1Q08471 SKS1YPL026C 1509 nt4.99□□□□□ -1.61
MSA1Q08471 SRP101YDR292C 1866 nt4.99□□□□□ -1.61
MSA1Q08471 YDL023CYDL023C 321 nt4.99□□□□□ -1.61
MSA1Q08471 YKR032WYKR032W 315 nt4.99□□□□□ -1.61
MSA1Q08471 YLR126CYLR126C 756 nt4.99□□□□□ -1.61
MSA1Q08471 PFK2YMR205C 2880 nt4.98□□□□□ -1.61
MSA1Q08471 TRP5YGL026C 2124 nt4.98□□□□□ -1.61
MSA1Q08471 COG1YGL223C 1254 nt4.98□□□□□ -1.61
MSA1Q08471 ATG36YJL185C 882 nt4.98□□□□□ -1.61
MSA1Q08471 KSH1YNL024C-A 219 nt4.98□□□□□ -1.61
MSA1Q08471 HIS7YBR248C 1659 nt4.98□□□□□ -1.61
MSA1Q08471 YEL020CYEL020C 1683 nt4.97□□□□□ -1.61
MSA1Q08471 YDR514CYDR514C 1452 nt4.97□□□□□ -1.61
MSA1Q08471 YJR146WYJR146W 354 nt4.97□□□□□ -1.61
MSA1Q08471 ASK1YKL052C 879 nt4.97□□□□□ -1.61
MSA1Q08471 GCV3YAL044C 513 nt4.97□□□□□ -1.61
MSA1Q08471 RPL10YLR075W 666 nt4.97□□□□□ -1.61
MSA1Q08471 ASN1YPR145W 1719 nt4.97□□□□□ -1.61
MSA1Q08471 HEM1YDR232W 1647 nt4.97□□□□□ -1.61
MSA1Q08471 CRP1YHR146W 1398 nt4.96□□□□□ -1.62
MSA1Q08471 MAK31YCR020C-A 267 nt4.96□□□□□ -1.62
MSA1Q08471 YDR415CYDR415C 1125 nt4.96□□□□□ -1.62
MSA1Q08471 OAC1YKL120W 975 nt4.96□□□□□ -1.62
MSA1Q08471 IRC11YOR013W 471 nt4.96□□□□□ -1.62
MSA1Q08471 YPR160C-AYPR160C-A 285 nt4.96□□□□□ -1.62
MSA1Q08471 STT3YGL022W 2157 nt4.96□□□□□ -1.62
MSA1Q08471 AVO1YOL078W 3531 nt4.96□□□□□ -1.62
MSA1Q08471 UTR2YEL040W 1404 nt4.96□□□□□ -1.62
MSA1Q08471 HST3YOR025W 1344 nt4.96□□□□□ -1.62
MSA1Q08471 GPI11YDR302W 660 nt4.95□□□□□ -1.62
MSA1Q08471 PRS2YER099C 957 nt4.95□□□□□ -1.62
MSA1Q08471 RPN11YFR004W 921 nt4.95□□□□□ -1.62
MSA1Q08471 YIL077CYIL077C 963 nt4.95□□□□□ -1.62
MSA1Q08471 GON7YJL184W 372 nt4.95□□□□□ -1.62
MSA1Q08471 SEC18YBR080C 2277 nt4.95□□□□□ -1.62
MSA1Q08471 SKN1YGR143W 2316 nt4.94□□□□□ -1.62
MSA1Q08471 COX9YDL067C 180 nt4.94□□□□□ -1.62
MSA1Q08471 MDE1YJR024C 735 nt4.94□□□□□ -1.62
MSA1Q08471 MOD5YOR274W 1287 nt4.94□□□□□ -1.62
MSA1Q08471 ECM31YBR176W 939 nt4.94□□□□□ -1.62
MSA1Q08471 YMR027WYMR027W 1413 nt4.94□□□□□ -1.62
MSA1Q08471 RSC30YHR056C 2652 nt4.93□□□□□ -1.62
MSA1Q08471 CHL4YDR254W 1377 nt4.93□□□□□ -1.62
MSA1Q08471 AFG1YEL052W 1530 nt4.93□□□□□ -1.62
MSA1Q08471 PPT1YGR123C 1542 nt4.93□□□□□ -1.62
MSA1Q08471 MNS1YJR131W 1650 nt4.93□□□□□ -1.62
MSA1Q08471 MTC5YDR128W 3447 nt4.93□□□□□ -1.62
MSA1Q08471 RPS5YJR123W 678 nt4.93□□□□□ -1.62
MSA1Q08471 PAT1YCR077C 2391 nt4.92□□□□□ -1.62
MSA1Q08471 IMA2YOL157C 1770 nt4.92□□□□□ -1.62
MSA1Q08471 YDR401WYDR401W 564 nt4.92□□□□□ -1.62
MSA1Q08471 YPT1YFL038C 621 nt4.92□□□□□ -1.62
MSA1Q08471 YIR020W-AYIR020W-A 243 nt4.92□□□□□ -1.62
MSA1Q08471 OGG1YML060W 1131 nt4.92□□□□□ -1.62
MSA1Q08471 RDL2YOR286W 450 nt4.92□□□□□ -1.62
MSA1Q08471 ICL1YER065C 1674 nt4.92□□□□□ -1.62
MSA1Q08471 MRC1YCL061C 3291 nt4.92□□□□□ -1.62
MSA1Q08471 HAS1YMR290C 1518 nt4.92□□□□□ -1.62
MSA1Q08471 YET3YDL072C 612 nt4.91□□□□□ -1.62
MSA1Q08471 YDL085C-AYDL085C-A 207 nt4.91□□□□□ -1.62
MSA1Q08471 RPP1YHR062C 882 nt4.91□□□□□ -1.62
MSA1Q08471 CAF40YNL288W 1122 nt4.91□□□□□ -1.62
MSA1Q08471 QNS1YHR074W 2145 nt4.91□□□□□ -1.62
MSA1Q08471 CDC19YAL038W 1503 nt4.91□□□□□ -1.62
MSA1Q08471 PYK2YOR347C 1521 nt4.91□□□□□ -1.62
MSA1Q08471 ATG7YHR171W 1893 nt4.9□□□□□ -1.62
MSA1Q08471 SAC6YDR129C 1929 nt4.9□□□□□ -1.62
MSA1Q08471 DFM1YDR411C 1026 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)BtG(GCC)B 71 nt4.9□□□□□ -1.63
MSA1Q08471 SUF16tG(GCC)C 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)D1tG(GCC)D1 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)D2tG(GCC)D2 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)EtG(GCC)E 71 nt4.9□□□□□ -1.63
MSA1Q08471 SUF20tG(GCC)F1 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)F2tG(GCC)F2 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)G1tG(GCC)G1 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)G2tG(GCC)G2 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)J1tG(GCC)J1 71 nt4.9□□□□□ -1.63
MSA1Q08471 SUF23tG(GCC)J2 71 nt4.9□□□□□ -1.63
MSA1Q08471 tG(GCC)MtG(GCC)M 71 nt4.9□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms