Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YLR361C-AYLR361C-A 297 nt6.59□□□□□ -1.35
VPS38Q05919 ESC8YOL017W 2145 nt6.59□□□□□ -1.35
VPS38Q05919 POX1YGL205W 2247 nt6.58□□□□□ -1.36
VPS38Q05919 BUD9YGR041W 1644 nt6.58□□□□□ -1.36
VPS38Q05919 NHA1YLR138W 2958 nt6.58□□□□□ -1.36
VPS38Q05919 GDA1YEL042W 1557 nt6.58□□□□□ -1.36
VPS38Q05919 RRP46YGR095C 672 nt6.58□□□□□ -1.36
VPS38Q05919 tR(ACG)DtR(ACG)D 73 nt6.58□□□□□ -1.36
VPS38Q05919 tR(ACG)EtR(ACG)E 73 nt6.58□□□□□ -1.36
VPS38Q05919 tR(ACG)KtR(ACG)K 73 nt6.58□□□□□ -1.36
VPS38Q05919 tR(ACG)LtR(ACG)L 73 nt6.58□□□□□ -1.36
VPS38Q05919 tR(ACG)OtR(ACG)O 73 nt6.58□□□□□ -1.36
VPS38Q05919 GYP8YFL027C 1494 nt6.58□□□□□ -1.36
VPS38Q05919 PAT1YCR077C 2391 nt6.58□□□□□ -1.36
VPS38Q05919 YPR196WYPR196W 1413 nt6.58□□□□□ -1.36
VPS38Q05919 YFL042CYFL042C 2025 nt6.57□□□□□ -1.36
VPS38Q05919 FRS2YFL022C 1512 nt6.57□□□□□ -1.36
VPS38Q05919 AIM3YBR108W 2844 nt6.57□□□□□ -1.36
VPS38Q05919 RMD9YGL107C 1941 nt6.57□□□□□ -1.36
VPS38Q05919 RPN11YFR004W 921 nt6.57□□□□□ -1.36
VPS38Q05919 RPL7AYGL076C 735 nt6.57□□□□□ -1.36
VPS38Q05919 YKL153WYKL153W 510 nt6.57□□□□□ -1.36
VPS38Q05919 TSA1YML028W 591 nt6.57□□□□□ -1.36
VPS38Q05919 MRPS12YNR036C 462 nt6.57□□□□□ -1.36
VPS38Q05919 RPL7BYPL198W 735 nt6.57□□□□□ -1.36
VPS38Q05919 CRF1YDR223W 1404 nt6.57□□□□□ -1.36
VPS38Q05919 RSA4YCR072C 1548 nt6.56□□□□□ -1.36
VPS38Q05919 CDC34YDR054C 888 nt6.56□□□□□ -1.36
VPS38Q05919 YHR218W-AYHR218W-A 318 nt6.56□□□□□ -1.36
VPS38Q05919 YJL211CYJL211C 444 nt6.56□□□□□ -1.36
VPS38Q05919 VPS24YKL041W 675 nt6.56□□□□□ -1.36
VPS38Q05919 YBL112CYBL112C 318 nt6.56□□□□□ -1.36
VPS38Q05919 MDM31YHR194W 1740 nt6.56□□□□□ -1.36
VPS38Q05919 ELP3YPL086C 1674 nt6.55□□□□□ -1.36
VPS38Q05919 CLB2YPR119W 1476 nt6.55□□□□□ -1.36
VPS38Q05919 SUP2tY(GUA)D 75 nt6.55□□□□□ -1.36
VPS38Q05919 SUP11tY(GUA)F1 75 nt6.55□□□□□ -1.36
VPS38Q05919 SUP6tY(GUA)F2 75 nt6.55□□□□□ -1.36
VPS38Q05919 SUP7tY(GUA)J1 75 nt6.55□□□□□ -1.36
VPS38Q05919 SUP4tY(GUA)J2 75 nt6.55□□□□□ -1.36
VPS38Q05919 SUP5tY(GUA)M1 75 nt6.55□□□□□ -1.36
VPS38Q05919 SUP8tY(GUA)M2 75 nt6.55□□□□□ -1.36
VPS38Q05919 SUP3tY(GUA)O 75 nt6.55□□□□□ -1.36
VPS38Q05919 LDS1YAL018C 978 nt6.55□□□□□ -1.36
VPS38Q05919 YMR252CYMR252C 405 nt6.55□□□□□ -1.36
VPS38Q05919 ACS1YAL054C 2142 nt6.55□□□□□ -1.36
VPS38Q05919 PDR18YNR070W 4002 nt6.54□□□□□ -1.36
VPS38Q05919 YLL067CYLL067C 3618 nt6.54□□□□□ -1.36
VPS38Q05919 YEL068CYEL068C 333 nt6.54□□□□□ -1.36
VPS38Q05919 YHM2YMR241W 945 nt6.54□□□□□ -1.36
VPS38Q05919 YPR114WYPR114W 948 nt6.54□□□□□ -1.36
VPS38Q05919 MCM3YEL032W 2916 nt6.54□□□□□ -1.36
VPS38Q05919 GAT1YFL021W 1533 nt6.54□□□□□ -1.36
VPS38Q05919 PSR2YLR019W 1194 nt6.53□□□□□ -1.36
VPS38Q05919 YNR040WYNR040W 771 nt6.53□□□□□ -1.36
VPS38Q05919 HAS1YMR290C 1518 nt6.53□□□□□ -1.36
VPS38Q05919 PKC1YBL105C 3456 nt6.53□□□□□ -1.36
VPS38Q05919 MTC5YDR128W 3447 nt6.53□□□□□ -1.36
VPS38Q05919 YET3YDL072C 612 nt6.52□□□□□ -1.37
VPS38Q05919 RPL10YLR075W 666 nt6.52□□□□□ -1.37
VPS38Q05919 MRPS16YPL013C 366 nt6.52□□□□□ -1.37
VPS38Q05919 NHP6BYBR089C-A 300 nt6.52□□□□□ -1.37
VPS38Q05919 MAK31YCR020C-A 267 nt6.51□□□□□ -1.37
VPS38Q05919 EEB1YPL095C 1371 nt6.51□□□□□ -1.37
VPS38Q05919 RAD3YER171W 2337 nt6.51□□□□□ -1.37
VPS38Q05919 OSW2YLR054C 2175 nt6.51□□□□□ -1.37
VPS38Q05919 YBR284WYBR284W 2394 nt6.51□□□□□ -1.37
VPS38Q05919 XBP1YIL101C 1944 nt6.5□□□□□ -1.37
VPS38Q05919 LAG2YOL025W 1983 nt6.5□□□□□ -1.37
VPS38Q05919 CDC1YDR182W 1476 nt6.5□□□□□ -1.37
VPS38Q05919 IVY1YDR229W 1362 nt6.5□□□□□ -1.37
VPS38Q05919 AIM20YIL158W 615 nt6.5□□□□□ -1.37
VPS38Q05919 TAL1YLR354C 1008 nt6.5□□□□□ -1.37
VPS38Q05919 EFT2YDR385W 2529 nt6.5□□□□□ -1.37
VPS38Q05919 EFT1YOR133W 2529 nt6.5□□□□□ -1.37
VPS38Q05919 CLB1YGR108W 1416 nt6.5□□□□□ -1.37
VPS38Q05919 KEX2YNL238W 2445 nt6.49□□□□□ -1.37
VPS38Q05919 ATG4YNL223W 1485 nt6.49□□□□□ -1.37
VPS38Q05919 YDR034W-BYDR034W-B 156 nt6.49□□□□□ -1.37
VPS38Q05919 QCR6YFR033C 444 nt6.49□□□□□ -1.37
VPS38Q05919 YJU3YKL094W 942 nt6.49□□□□□ -1.37
VPS38Q05919 SCS7YMR272C 1155 nt6.49□□□□□ -1.37
VPS38Q05919 ATP4YPL078C 735 nt6.49□□□□□ -1.37
VPS38Q05919 KTR5YNL029C 1569 nt6.48□□□□□ -1.37
VPS38Q05919 FRE5YOR384W 2085 nt6.48□□□□□ -1.37
VPS38Q05919 ORM1YGR038W 669 nt6.48□□□□□ -1.37
VPS38Q05919 YMR122CYMR122C 375 nt6.48□□□□□ -1.37
VPS38Q05919 YDR387CYDR387C 1668 nt6.48□□□□□ -1.37
VPS38Q05919 CYC8YBR112C 2901 nt6.48□□□□□ -1.37
VPS38Q05919 snR82snR82 268 nt6.47□□□□□ -1.37
VPS38Q05919 HAP3YBL021C 435 nt6.47□□□□□ -1.37
VPS38Q05919 SWP1YMR149W 861 nt6.47□□□□□ -1.37
VPS38Q05919 SCS22YBL091C-A 528 nt6.47□□□□□ -1.37
VPS38Q05919 GPB2YAL056W 2643 nt6.47□□□□□ -1.37
VPS38Q05919 NPL6YMR091C 1308 nt6.47□□□□□ -1.37
VPS38Q05919 PHB1YGR132C 864 nt6.46□□□□□ -1.38
VPS38Q05919 TSR3YOR006C 942 nt6.46□□□□□ -1.38
VPS38Q05919 OST3YOR085W 1053 nt6.46□□□□□ -1.38
VPS38Q05919 HIR1YBL008W 2523 nt6.46□□□□□ -1.38
VPS38Q05919 GUA1YMR217W 1578 nt6.45□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms