Protein–RNA interactions for Protein: Q05471

SWR1, Helicase SWR1, yeastyeast

Predictions only

Length 1,514 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWR1Q05471 YPT1YFL038C 621 nt10.38□□□□□ -0.75
SWR1Q05471 QNS1YHR074W 2145 nt10.38□□□□□ -0.75
SWR1Q05471 FBA1YKL060C 1080 nt10.38□□□□□ -0.75
SWR1Q05471 SAM4YPL273W 978 nt10.38□□□□□ -0.75
SWR1Q05471 YPL277CYPL277C 1464 nt10.38□□□□□ -0.75
SWR1Q05471 AIM24YJR080C 1185 nt10.38□□□□□ -0.75
SWR1Q05471 YJR115WYJR115W 510 nt10.38□□□□□ -0.75
SWR1Q05471 YBR144CYBR144C 315 nt10.37□□□□□ -0.75
SWR1Q05471 YCR097W-AYCR097W-A 267 nt10.36□□□□□ -0.75
SWR1Q05471 LOT6YLR011W 576 nt10.36□□□□□ -0.75
SWR1Q05471 RTT106YNL206C 1368 nt10.35□□□□□ -0.75
SWR1Q05471 BUD8YLR353W 1812 nt10.34□□□□□ -0.75
SWR1Q05471 ARO2YGL148W 1131 nt10.34□□□□□ -0.75
SWR1Q05471 COX18YGR062C 951 nt10.34□□□□□ -0.75
SWR1Q05471 MTR3YGR158C 753 nt10.34□□□□□ -0.75
SWR1Q05471 HSX1tR(CCU)J 72 nt10.34□□□□□ -0.75
SWR1Q05471 YJU3YKL094W 942 nt10.34□□□□□ -0.75
SWR1Q05471 RPL3YOR063W 1164 nt10.34□□□□□ -0.75
SWR1Q05471 AMD1YML035C 2433 nt10.34□□□□□ -0.75
SWR1Q05471 RTG2YGL252C 1767 nt10.34□□□□□ -0.75
SWR1Q05471 RKI1YOR095C 777 nt10.33□□□□□ -0.76
SWR1Q05471 ATG4YNL223W 1485 nt10.33□□□□□ -0.76
SWR1Q05471 GTT3YEL017W 1014 nt10.33□□□□□ -0.76
SWR1Q05471 YDR415CYDR415C 1125 nt10.32□□□□□ -0.76
SWR1Q05471 IES2YNL215W 963 nt10.32□□□□□ -0.76
SWR1Q05471 WHI2YOR043W 1461 nt10.31□□□□□ -0.76
SWR1Q05471 PEX31YGR004W 1389 nt10.31□□□□□ -0.76
SWR1Q05471 SNF4YGL115W 969 nt10.31□□□□□ -0.76
SWR1Q05471 DYS1YHR068W 1164 nt10.31□□□□□ -0.76
SWR1Q05471 SPC34YKR037C 888 nt10.3□□□□□ -0.76
SWR1Q05471 YLR112WYLR112W 420 nt10.3□□□□□ -0.76
SWR1Q05471 PKC1YBL105C 3456 nt10.3□□□□□ -0.76
SWR1Q05471 MIP1YOR330C 3765 nt10.3□□□□□ -0.76
SWR1Q05471 CAD1YDR423C 1230 nt10.29□□□□□ -0.76
SWR1Q05471 YJR012CYJR012C 624 nt10.29□□□□□ -0.76
SWR1Q05471 KTR1YOR099W 1182 nt10.29□□□□□ -0.76
SWR1Q05471 YCL065WYCL065W 369 nt10.28□□□□□ -0.76
SWR1Q05471 OST3YOR085W 1053 nt10.28□□□□□ -0.76
SWR1Q05471 EMP46YLR080W 1335 nt10.27□□□□□ -0.76
SWR1Q05471 APE3YBR286W 1614 nt10.27□□□□□ -0.76
SWR1Q05471 HDA1YNL021W 2121 nt10.27□□□□□ -0.77
SWR1Q05471 tR(ACG)DtR(ACG)D 73 nt10.27□□□□□ -0.77
SWR1Q05471 tR(ACG)EtR(ACG)E 73 nt10.27□□□□□ -0.77
SWR1Q05471 tR(ACG)KtR(ACG)K 73 nt10.27□□□□□ -0.77
SWR1Q05471 tR(ACG)LtR(ACG)L 73 nt10.27□□□□□ -0.77
SWR1Q05471 tR(ACG)OtR(ACG)O 73 nt10.27□□□□□ -0.77
SWR1Q05471 TOS6YNL300W 309 nt10.27□□□□□ -0.77
SWR1Q05471 AGP2YBR132C 1791 nt10.26□□□□□ -0.77
SWR1Q05471 NUP84YDL116W 2181 nt10.26□□□□□ -0.77
SWR1Q05471 LAS21YJL062W 2493 nt10.26□□□□□ -0.77
SWR1Q05471 YCR041WYCR041W 333 nt10.25□□□□□ -0.77
SWR1Q05471 IPI1YHR085W 1005 nt10.25□□□□□ -0.77
SWR1Q05471 YLR123CYLR123C 330 nt10.25□□□□□ -0.77
SWR1Q05471 MCM3YEL032W 2916 nt10.24□□□□□ -0.77
SWR1Q05471 PRC1YMR297W 1599 nt10.24□□□□□ -0.77
SWR1Q05471 JAC1YGL018C 555 nt10.23□□□□□ -0.77
SWR1Q05471 YKR018CYKR018C 2178 nt10.23□□□□□ -0.77
SWR1Q05471 YMC1YPR058W 924 nt10.23□□□□□ -0.77
SWR1Q05471 HBN1YCL026C-B 582 nt10.23□□□□□ -0.77
SWR1Q05471 GET3YDL100C 1065 nt10.22□□□□□ -0.77
SWR1Q05471 YMR119W-AYMR119W-A 375 nt10.22□□□□□ -0.77
SWR1Q05471 YRA1YDR381W 681 nt10.21□□□□□ -0.78
SWR1Q05471 YRF1-3YGR296W 5580 nt10.21□□□□□ -0.78
SWR1Q05471 YRF1-6YNL339C 5580 nt10.21□□□□□ -0.78
SWR1Q05471 YRF1-7YPL283C 5580 nt10.21□□□□□ -0.78
SWR1Q05471 YPL264CYPL264C 1062 nt10.2□□□□□ -0.78
SWR1Q05471 SEC24YIL109C 2781 nt10.2□□□□□ -0.78
SWR1Q05471 GUD1YDL238C 1470 nt10.2□□□□□ -0.78
SWR1Q05471 MMP1YLL061W 1752 nt10.19□□□□□ -0.78
SWR1Q05471 YPS7YDR349C 1791 nt10.19□□□□□ -0.78
SWR1Q05471 YJR107WYJR107W 987 nt10.18□□□□□ -0.78
SWR1Q05471 VPS70YJR126C 2436 nt10.18□□□□□ -0.78
SWR1Q05471 DJP1YIR004W 1299 nt10.17□□□□□ -0.78
SWR1Q05471 YHM2YMR241W 945 nt10.17□□□□□ -0.78
SWR1Q05471 CCT3YJL014W 1605 nt10.17□□□□□ -0.78
SWR1Q05471 TDA6YPR157W 1404 nt10.17□□□□□ -0.78
SWR1Q05471 VAM7YGL212W 951 nt10.17□□□□□ -0.78
SWR1Q05471 THI2YBR240C 1353 nt10.16□□□□□ -0.78
SWR1Q05471 YDR109CYDR109C 2148 nt10.16□□□□□ -0.78
SWR1Q05471 APS3YJL024C 585 nt10.16□□□□□ -0.78
SWR1Q05471 YIR042CYIR042C 711 nt10.15□□□□□ -0.78
SWR1Q05471 YLL059CYLL059C 507 nt10.14□□□□□ -0.79
SWR1Q05471 SER1YOR184W 1188 nt10.14□□□□□ -0.79
SWR1Q05471 YBR124WYBR124W 360 nt10.14□□□□□ -0.79
SWR1Q05471 RPL21AYBR191W 483 nt10.14□□□□□ -0.79
SWR1Q05471 YMR111CYMR111C 1389 nt10.14□□□□□ -0.79
SWR1Q05471 tN(GUU)CtN(GUU)C 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)FtN(GUU)F 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)GtN(GUU)G 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)KtN(GUU)K 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)LtN(GUU)L 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)N1tN(GUU)N1 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)N2tN(GUU)N2 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)O1tN(GUU)O1 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)O2tN(GUU)O2 74 nt10.13□□□□□ -0.79
SWR1Q05471 tN(GUU)PtN(GUU)P 74 nt10.13□□□□□ -0.79
SWR1Q05471 YOR012WYOR012W 414 nt10.12□□□□□ -0.79
SWR1Q05471 WTM1YOR230W 1314 nt10.12□□□□□ -0.79
SWR1Q05471 YHR070C-AYHR070C-A 411 nt10.12□□□□□ -0.79
SWR1Q05471 QCR8YJL166W 285 nt10.12□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms