Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS27AP62979 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
RPS27AP62979 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RPS27AP62979 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS27AP62979 AC133561.1-201ENST00000568600 2415 ntBASIC20.55■□□□□ 0.88
RPS27AP62979 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPS27AP62979 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RPS27AP62979 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.54■□□□□ 0.88
RPS27AP62979 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS27AP62979 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS27AP62979 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.54■□□□□ 0.88
RPS27AP62979 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS27AP62979 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS27AP62979 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPS27AP62979 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS27AP62979 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS27AP62979 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS27AP62979 AC138932.3-201ENST00000567634 1902 ntBASIC20.53■□□□□ 0.88
RPS27AP62979 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS27AP62979 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.53■□□□□ 0.88
RPS27AP62979 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.53■□□□□ 0.88
RPS27AP62979 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS27AP62979 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPS27AP62979 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPS27AP62979 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPS27AP62979 AL359258.2-201ENST00000564063 1566 ntBASIC20.52■□□□□ 0.88
RPS27AP62979 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.52■□□□□ 0.88
RPS27AP62979 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPS27AP62979 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPS27AP62979 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RPS27AP62979 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPS27AP62979 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPS27AP62979 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RPS27AP62979 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RPS27AP62979 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPS27AP62979 AL359504.2-201ENST00000605506 1601 ntBASIC20.51■□□□□ 0.87
RPS27AP62979 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.51■□□□□ 0.87
RPS27AP62979 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPS27AP62979 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.51■□□□□ 0.87
RPS27AP62979 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.5■□□□□ 0.87
RPS27AP62979 DUX4L11-201ENST00000611504 1267 ntBASIC20.5■□□□□ 0.87
RPS27AP62979 DUX4L12-201ENST00000614593 1267 ntBASIC20.5■□□□□ 0.87
RPS27AP62979 DUX4L14-201ENST00000621227 1267 ntBASIC20.5■□□□□ 0.87
RPS27AP62979 LINC00543-201ENST00000567234 1845 ntBASIC20.5■□□□□ 0.87
RPS27AP62979 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPS27AP62979 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RPS27AP62979 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.49■□□□□ 0.87
RPS27AP62979 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS27AP62979 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RPS27AP62979 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS27AP62979 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS27AP62979 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS27AP62979 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RPS27AP62979 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.49■□□□□ 0.87
RPS27AP62979 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.49■□□□□ 0.87
RPS27AP62979 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPS27AP62979 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPS27AP62979 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPS27AP62979 AL139125.2-201ENST00000623134 1869 ntBASIC20.48■□□□□ 0.87
RPS27AP62979 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPS27AP62979 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.48■□□□□ 0.87
RPS27AP62979 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
RPS27AP62979 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RPS27AP62979 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.48■□□□□ 0.87
RPS27AP62979 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPS27AP62979 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RPS27AP62979 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPS27AP62979 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.47■□□□□ 0.87
RPS27AP62979 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 HLA-V-202ENST00000446817 847 ntBASIC20.47■□□□□ 0.87
RPS27AP62979 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.47■□□□□ 0.87
RPS27AP62979 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RPS27AP62979 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPS27AP62979 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RPS27AP62979 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPS27AP62979 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPS27AP62979 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.46■□□□□ 0.87
RPS27AP62979 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.46■□□□□ 0.87
RPS27AP62979 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.46■□□□□ 0.87
RPS27AP62979 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPS27AP62979 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPS27AP62979 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RPS27AP62979 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPS27AP62979 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.46■□□□□ 0.87
RPS27AP62979 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPS27AP62979 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.87
RPS27AP62979 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms