Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
CXCR4P61073 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CXCR4P61073 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CXCR4P61073 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.88■■□□□ 1.09
CXCR4P61073 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CXCR4P61073 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CXCR4P61073 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.88■■□□□ 1.09
CXCR4P61073 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CXCR4P61073 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
CXCR4P61073 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.87■■□□□ 1.09
CXCR4P61073 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.87■■□□□ 1.09
CXCR4P61073 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CXCR4P61073 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CXCR4P61073 AL162393.1-201ENST00000437852 946 ntBASIC21.87■■□□□ 1.09
CXCR4P61073 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CXCR4P61073 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CXCR4P61073 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CXCR4P61073 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CXCR4P61073 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CXCR4P61073 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.86■■□□□ 1.09
CXCR4P61073 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CXCR4P61073 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CXCR4P61073 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CXCR4P61073 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CXCR4P61073 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
CXCR4P61073 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.85■■□□□ 1.09
CXCR4P61073 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.85■■□□□ 1.09
CXCR4P61073 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXCR4P61073 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.84■■□□□ 1.09
CXCR4P61073 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CXCR4P61073 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXCR4P61073 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CXCR4P61073 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CXCR4P61073 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CXCR4P61073 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CXCR4P61073 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CXCR4P61073 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
CXCR4P61073 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CXCR4P61073 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CXCR4P61073 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CXCR4P61073 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.82■■□□□ 1.08
CXCR4P61073 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.82■■□□□ 1.08
CXCR4P61073 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CXCR4P61073 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.82■■□□□ 1.08
CXCR4P61073 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.82■■□□□ 1.08
CXCR4P61073 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CXCR4P61073 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.81■■□□□ 1.08
CXCR4P61073 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CXCR4P61073 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CXCR4P61073 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCR4P61073 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCR4P61073 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CXCR4P61073 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CXCR4P61073 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCR4P61073 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCR4P61073 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CXCR4P61073 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CXCR4P61073 AC141586.4-201ENST00000624558 1573 ntBASIC21.79■■□□□ 1.08
CXCR4P61073 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXCR4P61073 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CXCR4P61073 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.79■■□□□ 1.08
CXCR4P61073 AC021231.2-201ENST00000594613 730 ntBASIC21.79■■□□□ 1.08
CXCR4P61073 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.79■■□□□ 1.08
CXCR4P61073 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXCR4P61073 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXCR4P61073 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CXCR4P61073 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.78■■□□□ 1.08
CXCR4P61073 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.78■■□□□ 1.08
CXCR4P61073 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CXCR4P61073 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CXCR4P61073 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CXCR4P61073 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.78■■□□□ 1.08
CXCR4P61073 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CXCR4P61073 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
CXCR4P61073 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CXCR4P61073 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CXCR4P61073 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CXCR4P61073 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CXCR4P61073 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CXCR4P61073 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CXCR4P61073 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.77■■□□□ 1.07
CXCR4P61073 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CXCR4P61073 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CXCR4P61073 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CXCR4P61073 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CXCR4P61073 DUSP8P5-201ENST00000422884 1815 ntBASIC21.76■■□□□ 1.07
CXCR4P61073 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.76■■□□□ 1.07
CXCR4P61073 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CXCR4P61073 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.76■■□□□ 1.07
CXCR4P61073 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CXCR4P61073 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms