Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 YPR196WYPR196W 1413 nt5.89□□□□□ -1.47
SEF1P34228 MIP1YOR330C 3765 nt5.89□□□□□ -1.47
SEF1P34228 BPL1YDL141W 2073 nt5.89□□□□□ -1.47
SEF1P34228 STT3YGL022W 2157 nt5.89□□□□□ -1.47
SEF1P34228 SEC18YBR080C 2277 nt5.88□□□□□ -1.47
SEF1P34228 RAD59YDL059C 717 nt5.88□□□□□ -1.47
SEF1P34228 HVG1YER039C 750 nt5.88□□□□□ -1.47
SEF1P34228 TAF11YML015C 1041 nt5.88□□□□□ -1.47
SEF1P34228 RFC4YOL094C 972 nt5.88□□□□□ -1.47
SEF1P34228 REG2YBR050C 1017 nt5.88□□□□□ -1.47
SEF1P34228 YMR279CYMR279C 1623 nt5.88□□□□□ -1.47
SEF1P34228 SIR2YDL042C 1689 nt5.88□□□□□ -1.47
SEF1P34228 HIS7YBR248C 1659 nt5.88□□□□□ -1.47
SEF1P34228 tG(GCC)BtG(GCC)B 71 nt5.87□□□□□ -1.47
SEF1P34228 SUF16tG(GCC)C 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)D1tG(GCC)D1 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)D2tG(GCC)D2 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)EtG(GCC)E 71 nt5.87□□□□□ -1.47
SEF1P34228 SUF20tG(GCC)F1 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)F2tG(GCC)F2 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)G1tG(GCC)G1 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)G2tG(GCC)G2 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)J1tG(GCC)J1 71 nt5.87□□□□□ -1.47
SEF1P34228 SUF23tG(GCC)J2 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)MtG(GCC)M 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)O1tG(GCC)O1 71 nt5.87□□□□□ -1.47
SEF1P34228 SUF17tG(GCC)O2 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)P1tG(GCC)P1 71 nt5.87□□□□□ -1.47
SEF1P34228 tG(GCC)P2tG(GCC)P2 71 nt5.87□□□□□ -1.47
SEF1P34228 ATG36YJL185C 882 nt5.87□□□□□ -1.47
SEF1P34228 YNR014WYNR014W 639 nt5.87□□□□□ -1.47
SEF1P34228 SCO2YBR024W 906 nt5.87□□□□□ -1.47
SEF1P34228 CTF19YPL018W 1110 nt5.87□□□□□ -1.47
SEF1P34228 YPL257WYPL257W 582 nt5.87□□□□□ -1.47
SEF1P34228 NOP7YGR103W 1818 nt5.86□□□□□ -1.47
SEF1P34228 DDC1YPL194W 1839 nt5.86□□□□□ -1.47
SEF1P34228 ASN1YPR145W 1719 nt5.86□□□□□ -1.47
SEF1P34228 KTR5YNL029C 1569 nt5.86□□□□□ -1.47
SEF1P34228 FAL1YDR021W 1200 nt5.86□□□□□ -1.47
SEF1P34228 SOH1YGL127C 384 nt5.86□□□□□ -1.47
SEF1P34228 YUR1YJL139C 1287 nt5.86□□□□□ -1.47
SEF1P34228 VPS24YKL041W 675 nt5.86□□□□□ -1.47
SEF1P34228 SUR7YML052W 909 nt5.86□□□□□ -1.47
SEF1P34228 YNL194CYNL194C 906 nt5.86□□□□□ -1.47
SEF1P34228 MSO1YNR049C 633 nt5.86□□□□□ -1.47
SEF1P34228 VMS1YDR049W 1899 nt5.85□□□□□ -1.47
SEF1P34228 PRP40YKL012W 1752 nt5.85□□□□□ -1.47
SEF1P34228 IMA2YOL157C 1770 nt5.85□□□□□ -1.47
SEF1P34228 SNF11YDR073W 510 nt5.85□□□□□ -1.47
SEF1P34228 YIL077CYIL077C 963 nt5.85□□□□□ -1.47
SEF1P34228 MIA40YKL195W 1212 nt5.85□□□□□ -1.47
SEF1P34228 GCN3YKR026C 918 nt5.85□□□□□ -1.47
SEF1P34228 ATG18YFR021W 1503 nt5.84□□□□□ -1.47
SEF1P34228 EAF5YEL018W 840 nt5.84□□□□□ -1.47
SEF1P34228 LYS1YIR034C 1122 nt5.84□□□□□ -1.47
SEF1P34228 DID2YKR035W-A 615 nt5.84□□□□□ -1.47
SEF1P34228 YPL102CYPL102C 303 nt5.84□□□□□ -1.47
SEF1P34228 LDB19YOR322C 2457 nt5.83□□□□□ -1.48
SEF1P34228 YDL172CYDL172C 480 nt5.83□□□□□ -1.48
SEF1P34228 SYF2YGR129W 648 nt5.83□□□□□ -1.48
SEF1P34228 YJR146WYJR146W 354 nt5.83□□□□□ -1.48
SEF1P34228 HAL1YPR005C 885 nt5.83□□□□□ -1.48
SEF1P34228 RSA4YCR072C 1548 nt5.83□□□□□ -1.48
SEF1P34228 ERG1YGR175C 1491 nt5.83□□□□□ -1.48
SEF1P34228 HOS2YGL194C 1359 nt5.82□□□□□ -1.48
SEF1P34228 YMR155WYMR155W 1644 nt5.82□□□□□ -1.48
SEF1P34228 ECM7YLR443W 1347 nt5.82□□□□□ -1.48
SEF1P34228 EDE1YBL047C 4146 nt5.82□□□□□ -1.48
SEF1P34228 TIM22YDL217C 624 nt5.82□□□□□ -1.48
SEF1P34228 EGD2YHR193C 525 nt5.82□□□□□ -1.48
SEF1P34228 OPI8YKR035C 642 nt5.82□□□□□ -1.48
SEF1P34228 RUF23RUF23 254 nt5.82□□□□□ -1.48
SEF1P34228 CSL4YNL232W 879 nt5.82□□□□□ -1.48
SEF1P34228 PMT3YOR321W 2262 nt5.82□□□□□ -1.48
SEF1P34228 PTC3YBL056W 1407 nt5.82□□□□□ -1.48
SEF1P34228 YEL020CYEL020C 1683 nt5.82□□□□□ -1.48
SEF1P34228 SRL2YLR082C 1179 nt5.81□□□□□ -1.48
SEF1P34228 YPL250W-AYPL250W-A 288 nt5.81□□□□□ -1.48
SEF1P34228 CSC1YLR241W 2349 nt5.81□□□□□ -1.48
SEF1P34228 PEX31YGR004W 1389 nt5.8□□□□□ -1.48
SEF1P34228 ARE2YNR019W 1929 nt5.8□□□□□ -1.48
SEF1P34228 SIT4YDL047W 936 nt5.8□□□□□ -1.48
SEF1P34228 GEF1YJR040W 2340 nt5.8□□□□□ -1.48
SEF1P34228 GUS1YGL245W 2127 nt5.79□□□□□ -1.48
SEF1P34228 YKR032WYKR032W 315 nt5.79□□□□□ -1.48
SEF1P34228 YKR073CYKR073C 321 nt5.79□□□□□ -1.48
SEF1P34228 PSR2YLR019W 1194 nt5.79□□□□□ -1.48
SEF1P34228 KSH1YNL024C-A 219 nt5.79□□□□□ -1.48
SEF1P34228 ODC2YOR222W 924 nt5.79□□□□□ -1.48
SEF1P34228 PTC4YBR125C 1182 nt5.79□□□□□ -1.48
SEF1P34228 YGR054WYGR054W 1929 nt5.79□□□□□ -1.48
SEF1P34228 HEM1YDR232W 1647 nt5.78□□□□□ -1.48
SEF1P34228 DON1YDR273W 1098 nt5.78□□□□□ -1.48
SEF1P34228 YDR415CYDR415C 1125 nt5.78□□□□□ -1.48
SEF1P34228 MDE1YJR024C 735 nt5.78□□□□□ -1.48
SEF1P34228 OGG1YML060W 1131 nt5.78□□□□□ -1.48
SEF1P34228 YML131WYML131W 1098 nt5.78□□□□□ -1.48
SEF1P34228 YMR147WYMR147W 672 nt5.78□□□□□ -1.48
SEF1P34228 YNR048WYNR048W 1182 nt5.78□□□□□ -1.48
SEF1P34228 TSR3YOR006C 942 nt5.78□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms