Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H2ABP04908 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.77■■□□□ 1.08
HIST1H2ABP04908 AC022413.1-201ENST00000624602 984 ntBASIC21.77■■□□□ 1.08
HIST1H2ABP04908 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H2ABP04908 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HIST1H2ABP04908 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.76■■□□□ 1.07
HIST1H2ABP04908 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H2ABP04908 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 SMPD5-203ENST00000639008 1464 ntBASIC21.75■■□□□ 1.07
HIST1H2ABP04908 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H2ABP04908 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2ABP04908 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2ABP04908 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2ABP04908 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HIST1H2ABP04908 AL157400.5-201ENST00000507624 621 ntBASIC21.74■■□□□ 1.07
HIST1H2ABP04908 MIR3960-201ENST00000583311 91 ntBASIC21.74■■□□□ 1.07
HIST1H2ABP04908 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2ABP04908 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.74■■□□□ 1.07
HIST1H2ABP04908 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H2ABP04908 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HIST1H2ABP04908 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H2ABP04908 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H2ABP04908 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H2ABP04908 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.73■■□□□ 1.07
HIST1H2ABP04908 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.73■■□□□ 1.07
HIST1H2ABP04908 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H2ABP04908 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H2ABP04908 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H2ABP04908 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.71■■□□□ 1.07
HIST1H2ABP04908 AC025884.2-201ENST00000553429 711 ntBASIC21.71■■□□□ 1.07
HIST1H2ABP04908 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H2ABP04908 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2ABP04908 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2ABP04908 ECEL1P2-201ENST00000461596 1295 ntBASIC21.7■■□□□ 1.06
HIST1H2ABP04908 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.7■■□□□ 1.06
HIST1H2ABP04908 AC092296.2-201ENST00000589470 999 ntBASIC21.7■■□□□ 1.06
HIST1H2ABP04908 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.7■■□□□ 1.06
HIST1H2ABP04908 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2ABP04908 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.7■■□□□ 1.06
HIST1H2ABP04908 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H2ABP04908 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.69■■□□□ 1.06
HIST1H2ABP04908 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H2ABP04908 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H2ABP04908 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H2ABP04908 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H2ABP04908 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
HIST1H2ABP04908 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST1H2ABP04908 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST1H2ABP04908 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HIST1H2ABP04908 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HIST1H2ABP04908 MIR4449-201ENST00000578365 66 ntBASIC21.68■■□□□ 1.06
HIST1H2ABP04908 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.68■■□□□ 1.06
HIST1H2ABP04908 AC096887.2-201ENST00000623443 1957 ntBASIC21.68■■□□□ 1.06
HIST1H2ABP04908 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST1H2ABP04908 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HIST1H2ABP04908 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HIST1H2ABP04908 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HIST1H2ABP04908 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
HIST1H2ABP04908 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
HIST1H2ABP04908 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HIST1H2ABP04908 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HIST1H2ABP04908 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.67■■□□□ 1.06
HIST1H2ABP04908 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.66■■□□□ 1.06
HIST1H2ABP04908 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.65■■□□□ 1.06
HIST1H2ABP04908 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HIST1H2ABP04908 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 516 ms