Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC189A1A4V9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC189A1A4V9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC189A1A4V9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC189A1A4V9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC189A1A4V9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
CCDC189A1A4V9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC189A1A4V9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC189A1A4V9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC189A1A4V9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC189A1A4V9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC189A1A4V9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC189A1A4V9 MIR3648-2-201ENST00000581792 180 ntBASIC23.89■■□□□ 1.41
CCDC189A1A4V9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CCDC189A1A4V9 MIR3648-1-201ENST00000615959 180 ntBASIC23.89■■□□□ 1.41
CCDC189A1A4V9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC189A1A4V9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC189A1A4V9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC189A1A4V9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CCDC189A1A4V9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC189A1A4V9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CCDC189A1A4V9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC189A1A4V9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC189A1A4V9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC189A1A4V9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.87■■□□□ 1.41
CCDC189A1A4V9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC189A1A4V9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC189A1A4V9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC189A1A4V9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC189A1A4V9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC189A1A4V9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
CCDC189A1A4V9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CCDC189A1A4V9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC189A1A4V9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 AL359504.2-201ENST00000605506 1601 ntBASIC23.84■■□□□ 1.41
CCDC189A1A4V9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.84■■□□□ 1.41
CCDC189A1A4V9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC189A1A4V9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC189A1A4V9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC189A1A4V9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC189A1A4V9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC189A1A4V9 ERN1-208ENST00000606895 2068 ntBASIC23.82■■□□□ 1.4
CCDC189A1A4V9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC189A1A4V9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC189A1A4V9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC189A1A4V9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC189A1A4V9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC189A1A4V9 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC189A1A4V9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC189A1A4V9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC189A1A4V9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC189A1A4V9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC189A1A4V9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC189A1A4V9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC189A1A4V9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC189A1A4V9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC189A1A4V9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 AL024507.2-201ENST00000606070 2574 ntBASIC23.78■■□□□ 1.4
CCDC189A1A4V9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CCDC189A1A4V9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC189A1A4V9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC189A1A4V9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.76■■□□□ 1.39
CCDC189A1A4V9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC189A1A4V9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CCDC189A1A4V9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC189A1A4V9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms