Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC093525.9-201ENST00000624961 1746 ntBASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 KLF4P1-201ENST00000412782 1185 ntBASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 MIR5100-201ENST00000579544 119 ntBASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGB3Q9Y5G1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 NUS1P2-201ENST00000417358 873 ntBASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 AL591684.3-201ENST00000605187 298 ntBASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 AC073592.5-201ENST00000624854 528 ntBASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB3Q9Y5G1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 C8orf49-201ENST00000525043 1968 ntBASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 RCN1P2-201ENST00000398357 915 ntBASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 AP002469.2-201ENST00000531724 424 ntBASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB3Q9Y5G1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms