Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 AC092910.1-201ENST00000482027 1129 ntBASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 Z83851.2-201ENST00000609564 659 ntBASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 AL138688.1-201ENST00000624851 1594 ntBASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 CROCCP1-201ENST00000426910 5675 ntBASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB6Q9Y5F9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 LINC00304-203ENST00000565008 1864 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 PCDHA14-201ENST00000506751 2298 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 PCDHA1-201ENST00000378133 2726 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 KRT18P27-201ENST00000427733 1299 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 AC034105.1-201ENST00000563488 319 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 AL589182.2-201ENST00000619332 1049 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 FLJ38576-201ENST00000623820 2459 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 AC104109.2-201ENST00000602919 1418 ntBASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB6Q9Y5F9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 AL020989.1-201ENST00000422979 469 ntBASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 RNA5SP415-201ENST00000517246 115 ntBASIC16.09■□□□□ 0.17
PCDHGB6Q9Y5F9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms