Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 MIR4751-201ENST00000578027 74 ntBASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB11Q9Y5F2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AC084018.2-201ENST00000613093 2607 ntBASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 ELK2BP-201ENST00000415014 1224 ntBASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 AC011676.5-201ENST00000624864 2660 ntBASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB11Q9Y5F2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 METTL21AP1-201ENST00000438852 635 ntBASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 LINC02084-201ENST00000606069 1096 ntBASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 AL590787.1-201ENST00000568856 1315 ntBASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB11Q9Y5F2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms