Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 AC008667.4-201ENST00000607370 168 ntBASIC17.05■□□□□ 0.32
PKP3Q9Y446 MIR7706-201ENST00000613747 67 ntBASIC17.05■□□□□ 0.32
PKP3Q9Y446 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.05■□□□□ 0.32
PKP3Q9Y446 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PKP3Q9Y446 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
PKP3Q9Y446 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 AL049840.3-201ENST00000602669 611 ntBASIC17.04■□□□□ 0.32
PKP3Q9Y446 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PKP3Q9Y446 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PKP3Q9Y446 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PKP3Q9Y446 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PKP3Q9Y446 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms