Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 AL390955.1-201ENST00000428694 934 ntBASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 MTCL1P1-201ENST00000446207 792 ntBASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 TCAF2P1-201ENST00000291129 2421 ntBASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
KCNIP3Q9Y2W7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 ITM2C-210ENST00000620962 501 ntBASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 AC005052.1-201ENST00000625181 2492 ntBASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
KCNIP3Q9Y2W7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 HMGA1P5-201ENST00000412453 271 ntBASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
KCNIP3Q9Y2W7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms