Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SYNPO2Q9UMS6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 AC092068.3-201ENST00000587894 2016 ntBASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 ALG1L8P-201ENST00000533887 760 ntBASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 PCDHB17P-201ENST00000539533 2393 ntBASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 AC018470.1-201ENST00000624790 3129 ntBASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.37■□□□□ 0.69
SYNPO2Q9UMS6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 MIR770-201ENST00000390219 98 ntBASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 AL138918.1-201ENST00000568306 659 ntBASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.36■□□□□ 0.69
SYNPO2Q9UMS6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 AL391256.1-201ENST00000443260 1855 ntBASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 PRYP6-201ENST00000514804 343 ntBASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNPO2Q9UMS6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms