Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 AC093525.9-201ENST00000624961 1746 ntBASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 AC011467.2-201ENST00000598425 242 ntBASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT11Q9UKZ1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.33■□□□□ 0.21
CNOT11Q9UKZ1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 RCN1P2-201ENST00000398357 915 ntBASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 AC096633.1-201ENST00000422446 749 ntBASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 MIR5100-201ENST00000579544 119 ntBASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 AL121894.2-201ENST00000602977 491 ntBASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 AC097374.2-201ENST00000618617 1306 ntBASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT11Q9UKZ1 AL662844.4-201ENST00000606367 2838 ntBASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT11Q9UKZ1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms