Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL135999.2-201ENST00000622438 1686 ntBASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 AC027612.4-201ENST00000605371 583 ntBASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 AC091812.2-201ENST00000619081 385 ntBASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.18■□□□□ 0.66
HDAC6Q9UBN7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 AC046185.3-201ENST00000623228 1824 ntBASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HDAC6Q9UBN7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 AL645939.2-201ENST00000427340 991 ntBASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HDAC6Q9UBN7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HDAC6Q9UBN7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms