Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 PTCHD3P3-201ENST00000403073 906 ntBASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PPARGC1AQ9UBK2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.71■□□□□ 0.42
PPARGC1AQ9UBK2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.71■□□□□ 0.42
PPARGC1AQ9UBK2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.71■□□□□ 0.42
PPARGC1AQ9UBK2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 LINC02012-201ENST00000608206 1725 ntBASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 AC243591.1-201ENST00000452967 1364 ntBASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 TERC-201ENST00000602385 541 ntBASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 AC005593.1-201ENST00000624894 515 ntBASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PPARGC1AQ9UBK2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 AC092910.1-201ENST00000482027 1129 ntBASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 RPS15P9-201ENST00000494093 319 ntBASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 IGHV3-22-201ENST00000520721 359 ntBASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 AC008667.4-201ENST00000607370 168 ntBASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 UBALD1-205ENST00000590891 2641 ntBASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.69■□□□□ 0.42
PPARGC1AQ9UBK2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PPARGC1AQ9UBK2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms