Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 MIR4515-201ENST00000584082 81 ntBASIC15.56■□□□□ 0.08
LRFN1Q9P244 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 KRT18P28-201ENST00000453838 1332 ntBASIC15.56■□□□□ 0.08
LRFN1Q9P244 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRFN1Q9P244 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LRFN1Q9P244 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 AC002056.1-201ENST00000395613 760 ntBASIC15.55■□□□□ 0.08
LRFN1Q9P244 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 AL133373.2-201ENST00000623187 2828 ntBASIC15.55■□□□□ 0.08
LRFN1Q9P244 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRFN1Q9P244 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.55■□□□□ 0.08
LRFN1Q9P244 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 METTL21AP1-201ENST00000438852 635 ntBASIC15.54■□□□□ 0.08
LRFN1Q9P244 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 AP000344.2-201ENST00000512987 629 ntBASIC15.54■□□□□ 0.08
LRFN1Q9P244 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 NOC2LP2-201ENST00000407594 1944 ntBASIC15.54■□□□□ 0.08
LRFN1Q9P244 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRFN1Q9P244 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.54■□□□□ 0.08
LRFN1Q9P244 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms