Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 DUX4L26-201ENST00000489078 1255 ntBASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 AC022616.7-201ENST00000525383 220 ntBASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 AC090616.6-201ENST00000582640 721 ntBASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.84□□□□□ -0.03
PCDHB16Q9NRJ7 PCDHA14-201ENST00000506751 2298 ntBASIC14.83□□□□□ -0.03
PCDHB16Q9NRJ7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.83□□□□□ -0.03
PCDHB16Q9NRJ7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB16Q9NRJ7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB16Q9NRJ7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PCDHB16Q9NRJ7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.83□□□□□ -0.03
PCDHB16Q9NRJ7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 AC046185.3-201ENST00000623228 1824 ntBASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 FAM220CP-201ENST00000395253 831 ntBASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 AC124947.2-201ENST00000547118 1133 ntBASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 AL049597.2-201ENST00000565575 961 ntBASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 AC109462.3-201ENST00000573934 613 ntBASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 AC011840.4-201ENST00000578471 627 ntBASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 AL590326.2-201ENST00000625139 305 ntBASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCDHB16Q9NRJ7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 AC010460.3-201ENST00000511359 1579 ntBASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 AC007967.3-201ENST00000434308 558 ntBASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDHB16Q9NRJ7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms