Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SLC22A20-204ENST00000530038 1673 ntBASIC19.97■□□□□ 0.79
RNF41Q9H4P4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AC025580.3-201ENST00000617932 1424 ntBASIC19.96■□□□□ 0.79
RNF41Q9H4P4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 LINC00895-201ENST00000629028 1637 ntBASIC19.96■□□□□ 0.79
RNF41Q9H4P4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AL031432.2-201ENST00000566714 459 ntBASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AC002347.1-201ENST00000569543 541 ntBASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AL928711.1-201ENST00000570165 459 ntBASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AC013467.2-201ENST00000605472 835 ntBASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 AC012569.1-201ENST00000591191 1524 ntBASIC19.96■□□□□ 0.79
RNF41Q9H4P4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF41Q9H4P4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RNF41Q9H4P4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 PDPK2P-202ENST00000562415 1191 ntBASIC19.95■□□□□ 0.78
RNF41Q9H4P4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 MIR4492-201ENST00000581627 80 ntBASIC19.95■□□□□ 0.78
RNF41Q9H4P4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF41Q9H4P4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 AC006277.1-201ENST00000624348 1610 ntBASIC19.94■□□□□ 0.78
RNF41Q9H4P4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF41Q9H4P4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 AC023274.1-201ENST00000418278 595 ntBASIC19.93■□□□□ 0.78
RNF41Q9H4P4 AC004832.2-201ENST00000426397 482 ntBASIC19.93■□□□□ 0.78
RNF41Q9H4P4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF41Q9H4P4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms