Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC239809.2-201ENST00000415381 517 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AL353807.1-201ENST00000427475 662 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC008687.5-201ENST00000593746 558 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC008622.2-201ENST00000617006 1229 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC100803.2-201ENST00000562459 1963 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 KRT16P1-201ENST00000399124 1418 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC006538.1-201ENST00000567905 1585 ntBASIC13.79□□□□□ -0.2
NKX6-2Q9C056 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX6-2Q9C056 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 LINC02012-201ENST00000608206 1725 ntBASIC13.78□□□□□ -0.2
NKX6-2Q9C056 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 AC026271.2-201ENST00000428091 497 ntBASIC13.78□□□□□ -0.2
NKX6-2Q9C056 NCF1B-203ENST00000435988 1254 ntBASIC13.78□□□□□ -0.2
NKX6-2Q9C056 UNC93B5-201ENST00000530315 699 ntBASIC13.78□□□□□ -0.2
NKX6-2Q9C056 MIR3180-4-201ENST00000582223 153 ntBASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX6-2Q9C056 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
NKX6-2Q9C056 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX6-2Q9C056 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.77□□□□□ -0.2
NKX6-2Q9C056 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.77□□□□□ -0.2
NKX6-2Q9C056 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
NKX6-2Q9C056 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.77□□□□□ -0.2
NKX6-2Q9C056 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms