Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 STK19B-204ENST00000512515 211 ntBASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 AF238378.1-201ENST00000526806 358 ntBASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 REXO1L6P-202ENST00000619970 1078 ntBASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 AC092171.3-201ENST00000610122 2651 ntBASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXP3Q9BZS1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 HLA-A-202ENST00000376806 1854 ntBASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 HLA-A-201ENST00000376802 1334 ntBASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 AC003669.1-201ENST00000334569 611 ntBASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 AC120114.3-201ENST00000611923 658 ntBASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXP3Q9BZS1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXP3Q9BZS1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms