Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 OR6D1P-202ENST00000641007 5290 ntBASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CNTNAP3Q9BZ76 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AC018470.1-201ENST00000624790 3129 ntBASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 COX5BP2-201ENST00000392354 334 ntBASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AC108725.1-201ENST00000495472 409 ntBASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AC007431.3-201ENST00000623221 587 ntBASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AL645728.2-201ENST00000641974 660 ntBASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 MTMR9LP-203ENST00000426597 1545 ntBASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 PKD1P1-201ENST00000458669 6805 ntBASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNTNAP3Q9BZ76 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 AC020916.1-201ENST00000587762 1774 ntBASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 AC004840.1-201ENST00000636359 365 ntBASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.11■□□□□ 0.17
CNTNAP3Q9BZ76 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms