Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.77■□□□□ 0.28
HDAC8Q9BY41 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDAC8Q9BY41 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.77■□□□□ 0.27
HDAC8Q9BY41 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.77■□□□□ 0.27
HDAC8Q9BY41 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HDAC8Q9BY41 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HDAC8Q9BY41 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.77■□□□□ 0.27
HDAC8Q9BY41 AC092068.3-201ENST00000587894 2016 ntBASIC16.77■□□□□ 0.27
HDAC8Q9BY41 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HDAC8Q9BY41 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.77■□□□□ 0.27
HDAC8Q9BY41 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 AC069335.1-201ENST00000489972 472 ntBASIC16.76■□□□□ 0.27
HDAC8Q9BY41 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 AC004449.1-201ENST00000564240 433 ntBASIC16.76■□□□□ 0.27
HDAC8Q9BY41 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 AL355385.1-201ENST00000606123 409 ntBASIC16.76■□□□□ 0.27
HDAC8Q9BY41 AC084121.4-201ENST00000641598 221 ntBASIC16.76■□□□□ 0.27
HDAC8Q9BY41 AF228730.8-201ENST00000642140 221 ntBASIC16.76■□□□□ 0.27
HDAC8Q9BY41 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HDAC8Q9BY41 AC139713.2-201ENST00000641328 2723 ntBASIC16.76■□□□□ 0.27
HDAC8Q9BY41 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 AC138932.1-201ENST00000534164 6830 ntBASIC16.75■□□□□ 0.27
HDAC8Q9BY41 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 IGHV3-62-201ENST00000520057 340 ntBASIC16.75■□□□□ 0.27
HDAC8Q9BY41 AP002490.2-201ENST00000524791 560 ntBASIC16.75■□□□□ 0.27
HDAC8Q9BY41 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 AC025678.2-201ENST00000562061 970 ntBASIC16.75■□□□□ 0.27
HDAC8Q9BY41 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 AC093028.1-201ENST00000622998 982 ntBASIC16.75■□□□□ 0.27
HDAC8Q9BY41 LINC00628-201ENST00000628516 1289 ntBASIC16.75■□□□□ 0.27
HDAC8Q9BY41 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.75■□□□□ 0.27
HDAC8Q9BY41 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms