Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40CQ96S21 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 AL513477.1-201ENST00000602865 2407 ntBASIC13.81□□□□□ -0.2
RAB40CQ96S21 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 FAM8A6P-201ENST00000407496 1135 ntBASIC13.81□□□□□ -0.2
RAB40CQ96S21 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 AP003733.1-201ENST00000491725 852 ntBASIC13.81□□□□□ -0.2
RAB40CQ96S21 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 GCSHP2-201ENST00000560971 527 ntBASIC13.81□□□□□ -0.2
RAB40CQ96S21 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 FAM87A-204ENST00000613235 858 ntBASIC13.81□□□□□ -0.2
RAB40CQ96S21 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.81□□□□□ -0.2
RAB40CQ96S21 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40CQ96S21 AL645728.1-201ENST00000366221 2101 ntBASIC13.81□□□□□ -0.2
RAB40CQ96S21 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40CQ96S21 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.8□□□□□ -0.2
RAB40CQ96S21 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 AC103564.2-201ENST00000432853 1299 ntBASIC13.8□□□□□ -0.2
RAB40CQ96S21 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 HLA-J-202ENST00000469281 1241 ntBASIC13.8□□□□□ -0.2
RAB40CQ96S21 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 AC079602.3-201ENST00000623931 403 ntBASIC13.8□□□□□ -0.2
RAB40CQ96S21 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 AL356309.3-201ENST00000624132 1934 ntBASIC13.8□□□□□ -0.2
RAB40CQ96S21 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RAB40CQ96S21 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40CQ96S21 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms