Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 KRT17P6-201ENST00000453795 1220 ntBASIC17.52■□□□□ 0.4
C9orf72Q96LT7 VENTXP7-201ENST00000475503 772 ntBASIC17.52■□□□□ 0.4
C9orf72Q96LT7 AC122714.2-201ENST00000502787 707 ntBASIC17.52■□□□□ 0.4
C9orf72Q96LT7 FOSL1P1-201ENST00000511041 816 ntBASIC17.52■□□□□ 0.4
C9orf72Q96LT7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 STK25P1-201ENST00000585406 838 ntBASIC17.52■□□□□ 0.4
C9orf72Q96LT7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.52■□□□□ 0.4
C9orf72Q96LT7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
C9orf72Q96LT7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 AC004870.1-201ENST00000315132 882 ntBASIC17.51■□□□□ 0.39
C9orf72Q96LT7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 AC091304.2-201ENST00000564639 760 ntBASIC17.51■□□□□ 0.39
C9orf72Q96LT7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 AC005336.2-201ENST00000593183 939 ntBASIC17.51■□□□□ 0.39
C9orf72Q96LT7 AL732292.2-201ENST00000609649 430 ntBASIC17.51■□□□□ 0.39
C9orf72Q96LT7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 AC132872.4-202ENST00000622924 2756 ntBASIC17.51■□□□□ 0.39
C9orf72Q96LT7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.51■□□□□ 0.39
C9orf72Q96LT7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
C9orf72Q96LT7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AL845331.1-201ENST00000424978 1190 ntBASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AC011840.4-201ENST00000578471 627 ntBASIC17.5■□□□□ 0.39
C9orf72Q96LT7 AL138831.2-201ENST00000606564 490 ntBASIC17.5■□□□□ 0.39
C9orf72Q96LT7 IFNL4P1-201ENST00000607083 540 ntBASIC17.5■□□□□ 0.39
C9orf72Q96LT7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
C9orf72Q96LT7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.49■□□□□ 0.39
C9orf72Q96LT7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
C9orf72Q96LT7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms