Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FGFR3P6-201ENST00000457012 610 ntBASIC17.96■□□□□ 0.47
TRIM11Q96F44 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 AC013467.2-201ENST00000605472 835 ntBASIC17.96■□□□□ 0.47
TRIM11Q96F44 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 REXO1L6P-202ENST00000619970 1078 ntBASIC17.96■□□□□ 0.47
TRIM11Q96F44 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM11Q96F44 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM11Q96F44 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.96■□□□□ 0.46
TRIM11Q96F44 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.96■□□□□ 0.46
TRIM11Q96F44 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM11Q96F44 AL139384.1-201ENST00000612143 3047 ntBASIC17.96■□□□□ 0.46
TRIM11Q96F44 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM11Q96F44 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 MTDHP4-201ENST00000600287 670 ntBASIC17.95■□□□□ 0.46
TRIM11Q96F44 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM11Q96F44 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM11Q96F44 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 SAPCD2P3-201ENST00000455031 850 ntBASIC17.94■□□□□ 0.46
TRIM11Q96F44 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 SART3-203ENST00000546611 1184 ntBASIC17.94■□□□□ 0.46
TRIM11Q96F44 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 AF228730.7-201ENST00000641842 219 ntBASIC17.94■□□□□ 0.46
TRIM11Q96F44 AL139011.1-202ENST00000642063 584 ntBASIC17.94■□□□□ 0.46
TRIM11Q96F44 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM11Q96F44 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM11Q96F44 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM11Q96F44 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRIM11Q96F44 TOP3BP1-201ENST00000420768 1380 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms