Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD4Q96DM1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 AKAP8P1-201ENST00000434743 1349 ntBASIC18.34■□□□□ 0.53
PGBD4Q96DM1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 AL139400.1-201ENST00000366220 510 ntBASIC18.34■□□□□ 0.53
PGBD4Q96DM1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 TFAMP1-201ENST00000412727 736 ntBASIC18.34■□□□□ 0.53
PGBD4Q96DM1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 AC025678.2-201ENST00000562061 970 ntBASIC18.34■□□□□ 0.53
PGBD4Q96DM1 AC093028.1-201ENST00000622998 982 ntBASIC18.34■□□□□ 0.53
PGBD4Q96DM1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD4Q96DM1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PGBD4Q96DM1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 AL009183.1-201ENST00000603760 355 ntBASIC18.33■□□□□ 0.52
PGBD4Q96DM1 AC106028.4-201ENST00000614509 607 ntBASIC18.33■□□□□ 0.52
PGBD4Q96DM1 AP001350.2-201ENST00000625104 1094 ntBASIC18.33■□□□□ 0.52
PGBD4Q96DM1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.33■□□□□ 0.52
PGBD4Q96DM1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 AL021920.2-201ENST00000624828 1351 ntBASIC18.32■□□□□ 0.52
PGBD4Q96DM1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PGBD4Q96DM1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms