Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTHRC1Q96CG8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CTHRC1Q96CG8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTHRC1Q96CG8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 AC087641.1-201ENST00000557561 1021 ntBASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 MIR4515-201ENST00000584082 81 ntBASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 CYP2A7P1-201ENST00000595391 815 ntBASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTHRC1Q96CG8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 ZNF259P1-201ENST00000407656 1365 ntBASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTHRC1Q96CG8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 AL671710.1-201ENST00000610245 2349 ntBASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.66■□□□□ 0.1
CTHRC1Q96CG8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms