Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CPNE4Q96A23 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CPNE4Q96A23 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 AL021920.2-201ENST00000624828 1351 ntBASIC15.24■□□□□ 0.03
CPNE4Q96A23 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 FRMD8P1-201ENST00000440433 1524 ntBASIC15.24■□□□□ 0.03
CPNE4Q96A23 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 AP000347.1-202ENST00000435868 847 ntBASIC15.24■□□□□ 0.03
CPNE4Q96A23 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 AC140113.2-201ENST00000604370 208 ntBASIC15.24■□□□□ 0.03
CPNE4Q96A23 AC064836.3-201ENST00000607928 673 ntBASIC15.24■□□□□ 0.03
CPNE4Q96A23 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.24■□□□□ 0.03
CPNE4Q96A23 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CPNE4Q96A23 AC002310.6-201ENST00000624451 1377 ntBASIC15.24■□□□□ 0.03
CPNE4Q96A23 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 AC007967.2-201ENST00000432613 625 ntBASIC15.23■□□□□ 0.03
CPNE4Q96A23 HCG4B-203ENST00000450128 991 ntBASIC15.23■□□□□ 0.03
CPNE4Q96A23 KRT18P3-201ENST00000451602 1288 ntBASIC15.23■□□□□ 0.03
CPNE4Q96A23 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 SLC25A6P2-201ENST00000497974 877 ntBASIC15.23■□□□□ 0.03
CPNE4Q96A23 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE4Q96A23 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE4Q96A23 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE4Q96A23 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE4Q96A23 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
CPNE4Q96A23 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CPNE4Q96A23 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE4Q96A23 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CPNE4Q96A23 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms