Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ACTL9-202ENST00000612068 1252 ntBASIC18.13■□□□□ 0.49
LMO3Q8TAP4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LMO3Q8TAP4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 AC009947.1-201ENST00000444350 727 ntBASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 AL662844.1-201ENST00000546340 181 ntBASIC18.12■□□□□ 0.49
LMO3Q8TAP4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 KRT8P39-201ENST00000396270 1433 ntBASIC18.12■□□□□ 0.49
LMO3Q8TAP4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LMO3Q8TAP4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 PRSS29P-201ENST00000440800 595 ntBASIC18.11■□□□□ 0.49
LMO3Q8TAP4 FAM185BP-201ENST00000443595 716 ntBASIC18.11■□□□□ 0.49
LMO3Q8TAP4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 CYP2A7P1-201ENST00000595391 815 ntBASIC18.11■□□□□ 0.49
LMO3Q8TAP4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LMO3Q8TAP4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 AC108751.1-201ENST00000490852 363 ntBASIC18.1■□□□□ 0.49
LMO3Q8TAP4 RNA5SP415-201ENST00000517246 115 ntBASIC18.1■□□□□ 0.49
LMO3Q8TAP4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.1■□□□□ 0.49
LMO3Q8TAP4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms