Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH19Q8TAB3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 AC002310.6-201ENST00000624451 1377 ntBASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH19Q8TAB3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 LINC00895-201ENST00000629028 1637 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 HLA-A-202ENST00000376806 1854 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 AL031284.1-201ENST00000419297 478 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 RPS15P9-201ENST00000494093 319 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 SLC25A6P2-201ENST00000497974 877 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 AC012640.2-201ENST00000561606 901 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 BX640515.1-201ENST00000617215 977 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 AC008735.5-201ENST00000623544 497 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 AF228730.7-201ENST00000641842 219 ntBASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH19Q8TAB3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH19Q8TAB3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms