Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 SPDYE21P-201ENST00000413323 827 ntBASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 AP000867.4-201ENST00000641616 219 ntBASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLHC1Q8NHS4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CLHC1Q8NHS4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 KRT18P35-201ENST00000510488 1269 ntBASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC092329.2-201ENST00000598402 547 ntBASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC138894.3-201ENST00000603787 634 ntBASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC093458.2-201ENST00000623150 629 ntBASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 AL645728.1-201ENST00000366221 2101 ntBASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.33■□□□□ 0.2
CLHC1Q8NHS4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.32■□□□□ 0.2
CLHC1Q8NHS4 AC012615.1-201ENST00000565797 1299 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms