Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 RHOQP1-201ENST00000555758 579 ntBASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
COL22A1Q8NFW1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 AC092506.1-202ENST00000401022 528 ntBASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 CSF2RBP1-201ENST00000447905 391 ntBASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 AC074044.1-201ENST00000609673 707 ntBASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 AL033527.5-201ENST00000641382 801 ntBASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL22A1Q8NFW1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 AC103810.3-201ENST00000583567 96 ntBASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL22A1Q8NFW1 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 AGER-214ENST00000538695 487 ntTSL 2 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
COL22A1Q8NFW1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL22A1Q8NFW1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL22A1Q8NFW1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms