Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 HMGA1P7-201ENST00000406908 502 ntBASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 RNA5SP421-201ENST00000516864 134 ntBASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 AC069262.1-201ENST00000539058 672 ntBASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 AL512356.2-201ENST00000546955 174 ntBASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 AJ011932.1-201ENST00000621707 465 ntBASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 LINC00304-203ENST00000565008 1864 ntBASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COLGALT1Q8NBJ5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 PMS2P4-201ENST00000412466 1052 ntBASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 GPS2P2-201ENST00000430745 888 ntBASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 AC051619.7-201ENST00000568314 623 ntBASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 AP001059.3-201ENST00000619053 235 ntBASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 AL161645.1-201ENST00000622716 1255 ntBASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 LYSMD4-203ENST00000378904 2122 ntBASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COLGALT1Q8NBJ5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 PP12613-201ENST00000424958 2230 ntBASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COLGALT1Q8NBJ5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms