Protein–RNA interactions for Protein: Q8N1V2

CFAP52, Cilia- and flagella-associated protein 52, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP52Q8N1V2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 AC124947.2-201ENST00000547118 1133 ntBASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP52Q8N1V2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP52Q8N1V2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP52Q8N1V2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP52Q8N1V2 KRT8P49-201ENST00000604166 1432 ntBASIC17.39■□□□□ 0.38
CFAP52Q8N1V2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 AC005829.1-201ENST00000570002 483 ntBASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 AC005412.3-201ENST00000580309 715 ntBASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 C20orf181-201ENST00000623918 480 ntBASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CFAP52Q8N1V2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 MIR4515-201ENST00000584082 81 ntBASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 PCDHB17P-201ENST00000539533 2393 ntBASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP52Q8N1V2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms