Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.04■□□□□ -0
RTTNQ86VV8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTTNQ86VV8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.03■□□□□ -0
RTTNQ86VV8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RTTNQ86VV8 AD000864.1-201ENST00000624076 2295 ntBASIC15.03■□□□□ -0
RTTNQ86VV8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.03■□□□□ -0
RTTNQ86VV8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 AC211486.1-202ENST00000416371 468 ntBASIC15.03■□□□□ -0
RTTNQ86VV8 AC211476.1-201ENST00000503899 468 ntBASIC15.03■□□□□ -0
RTTNQ86VV8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.03■□□□□ -0
RTTNQ86VV8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RTTNQ86VV8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RTTNQ86VV8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.03■□□□□ -0
RTTNQ86VV8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.03■□□□□ -0
RTTNQ86VV8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RTTNQ86VV8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
RTTNQ86VV8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RTTNQ86VV8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTTNQ86VV8 METTL21AP1-201ENST00000438852 635 ntBASIC15.02■□□□□ -0
RTTNQ86VV8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.02■□□□□ -0
RTTNQ86VV8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.02■□□□□ -0
RTTNQ86VV8 AC012640.2-201ENST00000561606 901 ntBASIC15.02■□□□□ -0
RTTNQ86VV8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.02■□□□□ -0
RTTNQ86VV8 AC008735.5-201ENST00000623544 497 ntBASIC15.02■□□□□ -0
RTTNQ86VV8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
RTTNQ86VV8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTTNQ86VV8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RTTNQ86VV8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RTTNQ86VV8 FLJ38576-201ENST00000623820 2459 ntBASIC15.02■□□□□ -0
RTTNQ86VV8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTTNQ86VV8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.02■□□□□ -0
RTTNQ86VV8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.02■□□□□ -0
RTTNQ86VV8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RTTNQ86VV8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RTTNQ86VV8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTTNQ86VV8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 MYCLP1-201ENST00000372451 1075 ntBASIC15.02□□□□□ -0.01
RTTNQ86VV8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.02□□□□□ -0.01
RTTNQ86VV8 STK25P1-201ENST00000585406 838 ntBASIC15.02□□□□□ -0.01
RTTNQ86VV8 MIR7706-201ENST00000613747 67 ntBASIC15.02□□□□□ -0.01
RTTNQ86VV8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.02□□□□□ -0.01
RTTNQ86VV8 AP000867.4-201ENST00000641616 219 ntBASIC15.02□□□□□ -0.01
RTTNQ86VV8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.02□□□□□ -0.01
RTTNQ86VV8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTTNQ86VV8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.02□□□□□ -0.01
RTTNQ86VV8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.02□□□□□ -0.01
RTTNQ86VV8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTTNQ86VV8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RTTNQ86VV8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.01□□□□□ -0.01
RTTNQ86VV8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTTNQ86VV8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTTNQ86VV8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTTNQ86VV8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.01□□□□□ -0.01
RTTNQ86VV8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.01□□□□□ -0.01
RTTNQ86VV8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.01□□□□□ -0.01
RTTNQ86VV8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms