Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AL353593.2-201ENST00000602529 1483 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AC106886.4-201ENST00000623557 2502 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 AC009336.1-201ENST00000608941 1553 ntBASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
MRPL55Q7Z7F7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 AC124947.2-201ENST00000547118 1133 ntBASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 DBP-204ENST00000599385 709 ntTSL 3 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 EGFEM1P-202ENST00000431685 1563 ntBASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
MRPL55Q7Z7F7 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
MRPL55Q7Z7F7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms