Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
KRT28Q7Z3Y7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 OSM-203ENST00000403463 464 ntTSL 3 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 AC022210.1-201ENST00000449856 793 ntBASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 CD81-207ENST00000481687 890 ntTSL 2 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 AC093004.1-201ENST00000508850 424 ntBASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 SPDYE18-201ENST00000510091 1050 ntBASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 AL512361.1-201ENST00000554200 418 ntBASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.67■■□□□ 1.22
KRT28Q7Z3Y7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 RNA5SP410-201ENST00000516285 106 ntBASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 AC044860.1-202ENST00000559481 777 ntBASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 AL606495.2-201ENST00000605867 535 ntBASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KRT28Q7Z3Y7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 AC007431.3-201ENST00000623221 587 ntBASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KRT28Q7Z3Y7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT28Q7Z3Y7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
KRT28Q7Z3Y7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
KRT28Q7Z3Y7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KRT28Q7Z3Y7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
KRT28Q7Z3Y7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 RN7SL837P-201ENST00000463010 287 ntBASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
KRT28Q7Z3Y7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms